RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 RBM46Q8TBY0 533 aaKnown RBP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 ATP6V0A4Q9HBG4 840 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 CNTNAP5Q8WYK1 1306 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 CD19P15391 556 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 OTUD6BQ8N6M0 293 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 C7orf25Q9BPX7 421 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 RASSF7Q02833 373 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 MIGA2Q7L4E1 593 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 NSUN6Q8TEA1 469 aaKnown RBP12.54□□□□□ -0.4
PTCH1-208ENST00000430669 TDRD3Q9H7E2 651 aaKnown RBP12.54□□□□□ -0.4
PTCH1-208ENST00000430669 PCDHB4Q9Y5E5 795 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 ITIH6Q6UXX5 1313 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 SNAP23O00161 211 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 PDHBP11177 359 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 ITIH3Q06033 890 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 PDXDC2PQ6P474 469 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 SHC4Q6S5L8 630 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 PLCH1Q4KWH8 1693 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 CASP7P55210 303 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 MYO1EQ12965 1108 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 KRT81Q14533 505 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 PDLIM2Q96JY6 352 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 EPB41L4AQ9HCS5 686 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-208ENST00000430669 ANXA13P27216 316 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 LACTBP83111 547 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-208ENST00000430669 SLC44A5Q8NCS7 719 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 NSMCE1Q8WV22 266 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 ATP2A3Q93084 1043 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 AP5M1Q9H0R1 490 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 SPTLC3Q9NUV7 552 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 NYAP2Q9P242 653 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 ABCB4P21439 1286 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 PRCPP42785 496 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 KNOP1Q1ED39 458 aaKnown RBP12.54□□□□□ -0.4
PTCH1-208ENST00000430669 MAP3K20Q9NYL2 800 aaKnown RBP12.54□□□□□ -0.4
PTCH1-208ENST00000430669 PCDHA13Q9Y5I0 950 aa12.54□□□□□ -0.4
PTCH1-208ENST00000430669 HSPA1LP34931 641 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 SNRPFP62306 86 aaKnown RBP12.53□□□□□ -0.4
PTCH1-208ENST00000430669 COASYQ13057 564 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 TKFCQ3LXA3 575 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 FRMD5Q7Z6J6 570 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 NEDD9Q14511 834 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 ERCC6LQ2NKX8 1250 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 FASTKD5Q7L8L6 764 aaKnown RBP12.53□□□□□ -0.4
PTCH1-208ENST00000430669 RHOT2Q8IXI1 618 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 FAM71BQ8TC56 605 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 PYCARDQ9ULZ3 195 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 AKT3Q9Y243 479 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 XRRA1Q6P2D8 792 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 CCDC63Q8NA47 563 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 PLCD4Q9BRC7 762 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 HESX1Q9UBX0 185 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 WDR46O15213 610 aaKnown RBP12.53□□□□□ -0.4
PTCH1-208ENST00000430669 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 C19orf81C9J6K1 198 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 PPM1FP49593 454 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-208ENST00000430669 QRICH1Q2TAL8 776 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 RNF10Q8N5U6 811 aaKnown RBP12.53□□□□□ -0.4
PTCH1-208ENST00000430669 RNF34Q969K3 372 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 SUGCTQ9HAC7 445 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 ODF2LQ9ULJ1 636 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 ZNF233A6NK53 670 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 STXBP3O00186 592 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 MXI1P50539 228 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 AFAP1L2Q8N4X5 818 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 AGBL3Q8NEM8 1001 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 KCNK9Q9NPC2 374 aa12.53□□□□□ -0.4
PTCH1-208ENST00000430669 QARSP47897 775 aaKnown RBP12.52□□□□□ -0.4
PTCH1-208ENST00000430669 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.4
PTCH1-208ENST00000430669 GLE1Q53GS7 698 aaKnown RBP12.52□□□□□ -0.4
PTCH1-208ENST00000430669 ENOSF1Q7L5Y1 443 aa12.52□□□□□ -0.4
PTCH1-208ENST00000430669 SAMD3Q8N6K7 520 aa12.52□□□□□ -0.4
PTCH1-208ENST00000430669 ZDHHC15Q96MV8 337 aa12.52□□□□□ -0.4
PTCH1-208ENST00000430669 EDEM3Q9BZQ6 932 aa12.52□□□□□ -0.4
PTCH1-208ENST00000430669 FAM114A2Q9NRY5 505 aa12.52□□□□□ -0.4
PTCH1-208ENST00000430669 KIF28PB7ZC32 967 aa12.52□□□□□ -0.4
PTCH1-208ENST00000430669 ERCC3P19447 782 aa12.52□□□□□ -0.4
PTCH1-208ENST00000430669 SOWAHDA6NJG2 315 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 K7ERI5 159 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 PGRMC1O00264 195 aaKnown RBP12.52□□□□□ -0.41
PTCH1-208ENST00000430669 SLC16A3O15427 465 aaKnown RBP12.52□□□□□ -0.41
PTCH1-208ENST00000430669 FKBP1AP62942 108 aaKnown RBP12.52□□□□□ -0.41
PTCH1-208ENST00000430669 ZBTB16Q05516 673 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 CCDC127Q96BQ5 260 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 WRNIP1Q96S55 665 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 RIOK1Q9BRS2 568 aaKnown RBP12.52□□□□□ -0.41
PTCH1-208ENST00000430669 CDK5RAP2Q96SN8 1893 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 MYO1FO00160 1098 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 GNAT1P11488 350 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 TTC39CQ8N584 583 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 PPM1EQ8WY54 764 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 EHD4Q9H223 541 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 BHMT2Q9H2M3 363 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 MAD2L2Q9UI95 211 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 GINS2Q9Y248 185 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 IPO5O00410 1097 aaKnown RBP12.52□□□□□ -0.41
PTCH1-208ENST00000430669 RNF8O76064 485 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 TNFAIP2Q03169 654 aa12.52□□□□□ -0.41
PTCH1-208ENST00000430669 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms