RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 IKQ13123 557 aaPredicted RBP15.78■□□□□ 0.12
ERCC3-202ENST00000426778 SEMA3FQ13275 785 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 RC3H1Q5TC82 1133 aaKnown RBP15.78■□□□□ 0.12
ERCC3-202ENST00000426778 CATSPER3Q86XQ3 398 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 PIK3R5Q8WYR1 880 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 TRIM31Q9BZY9 425 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 PCDHB13Q9Y5F0 798 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 NRAPQ86VF7 1730 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 NDUFAB1O14561 156 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 OPA1O60313 960 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 SERPINB2P05120 415 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 ITGA4P13612 1032 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 CLK2P49760 499 aaKnown RBP15.77■□□□□ 0.12
ERCC3-202ENST00000426778 GABPAQ06546 454 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 SLC20A2Q08357 652 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 MEI1Q5TIA1 1274 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 FBXW10Q5XX13 1052 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 PPP4R3AQ6IN85 833 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 ZNF572Q7Z3I7 529 aaPredicted RBP15.77■□□□□ 0.12
ERCC3-202ENST00000426778 REEP2Q9BRK0 252 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 GANQ9H2C0 597 aa15.77■□□□□ 0.12
ERCC3-202ENST00000426778 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.77■□□□□ 0.126e-7■■■■■ 168.7
ERCC3-202ENST00000426778 BCCIPQ9P287 314 aaKnown RBP eCLIP15.77■□□□□ 0.12
ERCC3-202ENST00000426778 GOLGA8KD6RF30 607 aa15.77■□□□□ 0.11
ERCC3-202ENST00000426778 PSMD2Q13200 908 aa15.77■□□□□ 0.11
ERCC3-202ENST00000426778 CEP85LQ5SZL2 805 aa15.77■□□□□ 0.11
ERCC3-202ENST00000426778 INPP4AQ96PE3 977 aaPredicted RBP15.77■□□□□ 0.11
ERCC3-202ENST00000426778 RGL1Q9NZL6 768 aa15.77■□□□□ 0.11
ERCC3-202ENST00000426778 SNHG28P0DPA3 235 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 HOXD13P35453 343 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 FLT3P36888 993 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 ERVK-9P63128 1117 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 PIGOQ8TEQ8 1089 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 KAT2BQ92831 832 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 ANO3Q9BYT9 981 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 NEUROG2Q9H2A3 272 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 LRRC4CQ9HCJ2 640 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 CETN3O15182 167 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 CHMP2AO43633 222 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 AKAP3O75969 853 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 GDF11O95390 407 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 UBXN2AP68543 259 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 PROM2Q8N271 834 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 RNF10Q8N5U6 811 aaKnown RBP15.76■□□□□ 0.11
ERCC3-202ENST00000426778 CELF4Q9BZC1 486 aaKnown RBP15.76■□□□□ 0.11
ERCC3-202ENST00000426778 GDF3Q9NR23 364 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 PLAAQ9Y263 795 aa15.76■□□□□ 0.11
ERCC3-202ENST00000426778 SHTN1A0MZ66 631 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 UCHL3P15374 230 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 ATP2B4P23634 1241 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 RPS6KA1Q15418 735 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 TAF4BQ92750 862 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 DHX36Q9H2U1 1008 aaKnown RBP15.75■□□□□ 0.11
ERCC3-202ENST00000426778 GAKO14976 1311 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 RBAK-RBAKDNI3L0D1 243 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 ITIH3Q06033 890 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 TRMT1LQ7Z2T5 733 aaKnown RBP15.75■□□□□ 0.11
ERCC3-202ENST00000426778 IRF2BP2Q7Z5L9 587 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 TADA2BQ86TJ2 420 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 SPICE1Q8N0Z3 855 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 USP38Q8NB14 1042 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 IQCDQ96DY2 449 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 BHMT2Q9H2M3 363 aa15.75■□□□□ 0.11
ERCC3-202ENST00000426778 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
ERCC3-202ENST00000426778 ARMCX3Q9UH62 379 aaPredicted RBP15.75■□□□□ 0.11
ERCC3-202ENST00000426778 ABCB4P21439 1286 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 SLC12A3P55017 1021 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 PAK2Q13177 524 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 CDC37Q16543 378 aaPredicted RBP15.74■□□□□ 0.11
ERCC3-202ENST00000426778 ALKBH5Q6P6C2 394 aaKnown RBP15.74■□□□□ 0.11
ERCC3-202ENST00000426778 IQCKQ8N0W5 287 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 CAVIN3Q969G5 261 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 AMACRQ9UHK6 382 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 ARFGEF1Q9Y6D6 1849 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 ABCB11O95342 1321 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 FAM86B1E9PN63 330 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 GFPT2O94808 682 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 GCNT3O95395 438 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 FAM86B2P0C5J1 330 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 EEF2P13639 858 aaKnown RBP15.74■□□□□ 0.11
ERCC3-202ENST00000426778 PON1P27169 355 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 SMARCA1P28370 1054 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 GIT2Q14161 759 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 EXOC3L4Q17RC7 722 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 ZC2HC1CQ53FD0 456 aaPredicted RBP15.74■□□□□ 0.11
ERCC3-202ENST00000426778 DPH5Q9H2P9 285 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 DNAJC18Q9H819 358 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 PPANQ9NQ55 473 aaKnown RBP15.74■□□□□ 0.11
ERCC3-202ENST00000426778 CHORDC1Q9UHD1 332 aaPredicted RBP15.74■□□□□ 0.11
ERCC3-202ENST00000426778 PCDHGC5Q9Y5F6 944 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 IGKV6D-41A0A0C4DH26 115 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 RBM5P52756 815 aaKnown RBP eCLIP15.74■□□□□ 0.11
ERCC3-202ENST00000426778 PRPF4BQ13523 1007 aaKnown RBP15.74■□□□□ 0.11
ERCC3-202ENST00000426778 COG2Q14746 738 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 CDC42EP5Q6NZY7 148 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 U2AF1L4Q8WU68 220 aaKnown RBP15.74■□□□□ 0.11
ERCC3-202ENST00000426778 PPM1EQ8WY54 764 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 RUSC1Q9BVN2 902 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 LRRC27Q9C0I9 530 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 NT5C3AQ9H0P0 336 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms