RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 SMARCAD1Q9H4L7 1026 aa14.5□□□□□ -0.09
GPC1-204ENST00000426280 GBF1Q92538 1859 aa14.5□□□□□ -0.09
GPC1-204ENST00000426280 PTPRSQ13332 1948 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 EMSYQ7Z589 1322 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 FAM205CA6NFA0 338 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 RSPH10B2B2RC85 870 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 RFXAPO00287 272 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 IPO5O00410 1097 aaKnown RBP14.49□□□□□ -0.09
GPC1-204ENST00000426280 MSH4O15457 936 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 JAK2O60674 1132 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 TDP2O95551 362 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 PFKMP08237 780 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 RSPH10BP0C881 870 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 ATP2A2P16615 1042 aaKnown RBP14.49□□□□□ -0.09
GPC1-204ENST00000426280 WDR5P61964 334 aaKnown RBP14.49□□□□□ -0.09
GPC1-204ENST00000426280 PPFIA1Q13136 1202 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
GPC1-204ENST00000426280 CCDC60Q8IWA6 550 aaPredicted RBP14.49□□□□□ -0.09
GPC1-204ENST00000426280 TRIM22Q8IYM9 498 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 BLIDQ8IZY5 108 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 TBCKQ8TEA7 893 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 SDF4Q9BRK5 362 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 ZNF577Q9BSK1 485 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 ERAP1Q9NZ08 941 aa14.49□□□□□ -0.09
GPC1-204ENST00000426280 NRCAMQ92823 1304 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 LCHNA4D1U4 455 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 MBLAC1A4D2B0 266 aaPredicted RBP14.48□□□□□ -0.09
GPC1-204ENST00000426280 RBM25P49756 843 aaKnown RBP14.48□□□□□ -0.09
GPC1-204ENST00000426280 STAT5BP51692 787 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 ADGRE1Q14246 886 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 FAM26DQ5JW98 314 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 SWSAP1Q6NVH7 229 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 CCDC155Q8N6L0 562 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 DAGLBQ8NCG7 672 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 CCDC148Q8NFR7 591 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 DNAJB3Q8WWF6 145 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 PHF20Q9BVI0 1012 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 PRDM12Q9H4Q4 367 aa14.48□□□□□ -0.09
GPC1-204ENST00000426280 ZNF215Q9UL58 517 aaPredicted RBP14.48□□□□□ -0.09
GPC1-204ENST00000426280 EPOPA6NHQ4 379 aa14.47□□□□□ -0.09
GPC1-204ENST00000426280 ZBTB42B2RXF5 422 aa14.47□□□□□ -0.09
GPC1-204ENST00000426280 FOSBP53539 338 aa14.47□□□□□ -0.09
GPC1-204ENST00000426280 MGAT3Q09327 533 aa14.47□□□□□ -0.09
GPC1-204ENST00000426280 PLEKHG4Q58EX7 1191 aa14.47□□□□□ -0.09
GPC1-204ENST00000426280 CNKSR3Q6P9H4 555 aa14.47□□□□□ -0.09
GPC1-204ENST00000426280 PLPPR4Q7Z2D5 763 aa14.47□□□□□ -0.09
GPC1-204ENST00000426280 TRMT1LQ7Z2T5 733 aaKnown RBP14.47□□□□□ -0.09
GPC1-204ENST00000426280 HERC6Q8IVU3 1022 aa14.47□□□□□ -0.09
GPC1-204ENST00000426280 NSUN7Q8NE18 718 aaKnown RBP14.47□□□□□ -0.09
GPC1-204ENST00000426280 GTF3C6Q969F1 213 aa14.47□□□□□ -0.09
GPC1-204ENST00000426280 CERS4Q9HA82 394 aa14.47□□□□□ -0.09
GPC1-204ENST00000426280 UPF2Q9HAU5 1272 aaKnown RBP14.47□□□□□ -0.09
GPC1-204ENST00000426280 ORC3Q9UBD5 711 aaPredicted RBP14.47□□□□□ -0.09
GPC1-204ENST00000426280 COL6A3P12111 3177 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 CA3P07451 260 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 ACTN1P12814 892 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 USP11P51784 963 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 TMEM62Q0P6H9 643 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 INF2Q27J81 1249 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 USP38Q8NB14 1042 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 BICD2Q8TD16 824 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 SLC5A5Q92911 643 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 MBOAT7Q96N66 472 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 TBC1D32Q96NH3 1257 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 MTIF3Q9H2K0 278 aaKnown RBP14.46□□□□□ -0.09
GPC1-204ENST00000426280 MSRAQ9UJ68 235 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 PCDHA11Q9Y5I1 949 aa14.46□□□□□ -0.09
GPC1-204ENST00000426280 CHD9Q3L8U1 2897 aa14.46□□□□□ -0.1
GPC1-204ENST00000426280 STK36Q9NRP7 1315 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 TMEM265A0A087WTH1 108 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 CYP3A7-CYP3A51PA0A087WV96 503 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.45□□□□□ -0.1
GPC1-204ENST00000426280 POTEB3A0JP26 581 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 WNT7AO00755 349 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 SLC37A4O43826 429 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 ZNF862O60290 1169 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 GNAT1P11488 350 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 CYP3A7P24462 503 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 TAP1Q03518 808 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 NR5A1Q13285 461 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 RAB30Q15771 203 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 UGCGQ16739 394 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 MCTP2Q6DN12 878 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 FAM117BQ6P1L5 589 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 POTEBQ6S5H4 581 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 PHOSPHO2Q8TCD6 241 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 TNFRSF25Q93038 417 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 FAM49AQ9H0Q0 323 aaPredicted RBP14.45□□□□□ -0.1
GPC1-204ENST00000426280 UNC45AQ9H3U1 944 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 AZI2Q9H6S1 392 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 AGO3Q9H9G7 860 aaKnown RBP14.45□□□□□ -0.1
GPC1-204ENST00000426280 CDHR5Q9HBB8 845 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 ZNF302Q9NR11 478 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 TUBE1Q9UJT0 475 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 TRPC6Q9Y210 931 aa14.45□□□□□ -0.1
GPC1-204ENST00000426280 MAFBQ9Y5Q3 323 aaPredicted RBP14.45□□□□□ -0.1
GPC1-204ENST00000426280 SIP14410 1827 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 ABHD14A-ACY1A0A1B0GW23 586 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 BACH1O14867 736 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 PSMD10O75832 226 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms