RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TMEM184AQ6ZMB5 413 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 CCDC149Q6ZUS6 474 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 C12orf76Q8N812 135 aaPredicted RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 NSUN6Q8TEA1 469 aaKnown RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 GPR20Q99678 358 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 TUT1Q9H6E5 874 aaKnown RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 MLXIPQ9HAP2 919 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 RC3H2Q9HBD1 1191 aaKnown RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 GPCPD1Q9NPB8 672 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 NGRNQ9NPE2 291 aaKnown RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 SETD4Q9NVD3 440 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 WNT16Q9UBV4 365 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 DAXXQ9UER7 740 aaPredicted RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 PNMA2Q9UL42 364 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 USTQ9Y2C2 406 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.43□□□□□ -1.22
SDCBP-203ENST00000424270 CCDC171Q6TFL3 1326 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 WDR87Q6ZQQ6 2873 aa7.43□□□□□ -1.22
SDCBP-203ENST00000424270 CEP250Q9BV73 2442 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 HIDE1A8MVS5 230 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 SCG2P13521 617 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 ADD2P35612 726 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 RBM25P49756 843 aaKnown RBP7.42□□□□□ -1.22
SDCBP-203ENST00000424270 TFAP4Q01664 338 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 KRT17Q04695 432 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 N4BP2L1Q5TBK1 243 aaPredicted RBP7.42□□□□□ -1.22
SDCBP-203ENST00000424270 SYDE2Q5VT97 1194 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 LRSAM1Q6UWE0 723 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 UNQ6494/PRO21346Q6UXR6 183 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 BORCS6Q96GS4 357 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 BCO2Q9BYV7 579 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 RANBP17Q9H2T7 1088 aaKnown RBP7.42□□□□□ -1.22
SDCBP-203ENST00000424270 RNPEPQ9H4A4 650 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 KCNK12Q9HB15 430 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 BMP2KQ9NSY1 1161 aaPredicted RBP7.42□□□□□ -1.22
SDCBP-203ENST00000424270 DDX41Q9UJV9 622 aaKnown RBP7.42□□□□□ -1.22
SDCBP-203ENST00000424270 PCDHB7Q9Y5E2 793 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 PCDHGA2Q9Y5H1 932 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 HCFC2Q9Y5Z7 792 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 SPTBN2O15020 2390 aa7.42□□□□□ -1.22
SDCBP-203ENST00000424270 FRMPD2Q68DX3 1309 aaPredicted RBP7.42□□□□□ -1.22
SDCBP-203ENST00000424270 BAZ2AQ9UIF9 1905 aaKnown RBP7.42□□□□□ -1.22
SDCBP-203ENST00000424270 IGKV6D-41A0A0C4DH26 115 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 KRBA1A5PL33 1030 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 POTEMA6NI47 508 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 C1QTNF9BB2RNN3 333 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 M0QZ92 97 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 PLA2G6O60733 806 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 GGPS1O95749 300 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 IFIT2P09913 472 aaKnown RBP7.41□□□□□ -1.22
SDCBP-203ENST00000424270 C1QTNF9P0C862 333 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 MYCLP12524 364 aaPredicted RBP7.41□□□□□ -1.22
SDCBP-203ENST00000424270 EIF2AK2P19525 551 aaKnown RBP7.41□□□□□ -1.22
SDCBP-203ENST00000424270 CD52P31358 61 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 GBP2P32456 591 aaPredicted RBP7.41□□□□□ -1.22
SDCBP-203ENST00000424270 SMC1AQ14683 1233 aaKnown RBP7.41□□□□□ -1.22
SDCBP-203ENST00000424270 LPIN1Q14693 890 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 KIAA1841Q6NSI8 718 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 ZSCAN25Q6NSZ9 544 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 POTEGQ6S5H5 508 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 TMC5Q6UXY8 1006 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 PRR23BQ6ZRT6 265 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 TSHZ1Q6ZSZ6 1077 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 CABP7Q86V35 215 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 COLGALT1Q8NBJ5 622 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 RASGRP4Q8TDF6 673 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 MRPS27Q92552 414 aaKnown RBP7.41□□□□□ -1.22
SDCBP-203ENST00000424270 EMID1Q96A84 441 aaPredicted RBP7.41□□□□□ -1.22
SDCBP-203ENST00000424270 RMDN3Q96TC7 470 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 FTHL17Q9BXU8 183 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 ARHGEF3Q9NR81 526 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 PAG1Q9NWQ8 432 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 IGSF9Q9P2J2 1179 aa7.41□□□□□ -1.22
SDCBP-203ENST00000424270 ZNF215Q9UL58 517 aaPredicted RBP7.41□□□□□ -1.22
SDCBP-203ENST00000424270 MYH4Q9Y623 1939 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 TSPY2A6NKD2 308 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 FSCN2O14926 492 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 TBC1D4O60343 1298 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 EIF3JO75822 258 aaKnown RBP7.4□□□□□ -1.22
SDCBP-203ENST00000424270 CHRNA1P02708 482 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 LAG3P18627 525 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 PMLP29590 882 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 RING1Q06587 406 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 PAK2Q13177 524 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 ZNF528Q3MIS6 628 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 HSDL1Q3SXM5 330 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 UTP14CQ5TAP6 766 aaKnown RBP7.4□□□□□ -1.22
SDCBP-203ENST00000424270 TTBK2Q6IQ55 1244 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 KANK3Q6NY19 840 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 DCLRE1AQ6PJP8 1040 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 RASGRP2Q7LDG7 609 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 ERC1Q8IUD2 1116 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 NEDD1Q8NHV4 660 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 DCAF4Q8WV16 495 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 CLEC4DQ8WXI8 215 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 SHDQ96IW2 340 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 FOXQ1Q9C009 403 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 IL1RAPL2Q9NP60 686 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 PARD6AQ9NPB6 346 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms