RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SCN10AQ9Y5Y9 1956 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 EPOPA6NHQ4 379 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 RRN3P2A6NIE6 340 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 CPLX1O14810 134 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 CAND2O75155 1236 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 GJB5O95377 273 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 GHRP10912 638 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 IFNAR1P17181 557 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 NLRP5P59047 1200 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 ADAM17P78536 824 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 SSRP1Q08945 709 aaKnown RBP10.57□□□□□ -0.72
NUP50-206ENST00000422489 PLCB4Q15147 1175 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 FAM26DQ5JW98 314 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 MARCH8Q5T0T0 291 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 TAF2Q6P1X5 1199 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 TRMT1LQ7Z2T5 733 aaKnown RBP10.57□□□□□ -0.72
NUP50-206ENST00000422489 SPRED2Q7Z698 418 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 TEX2Q8IWB9 1127 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 REXO1Q8N1G1 1221 aaKnown RBP10.57□□□□□ -0.72
NUP50-206ENST00000422489 FBXL16Q8N461 479 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 BICD2Q8TD16 824 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 RASGRP4Q8TDF6 673 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 ZNF577Q9BSK1 485 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 UPF3BQ9BZI7 483 aaKnown RBP10.57□□□□□ -0.72
NUP50-206ENST00000422489 ZMYND12Q9H0C1 365 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 FAM49AQ9H0Q0 323 aaPredicted RBP10.57□□□□□ -0.72
NUP50-206ENST00000422489 PDRG1Q9NUG6 133 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 VPS54Q9P1Q0 977 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 TUBE1Q9UJT0 475 aa10.57□□□□□ -0.72
NUP50-206ENST00000422489 FAM86B1E9PN63 330 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 CHRNA1P02708 482 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 CYP3A4P08684 503 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 FAM86B2P0C5J1 330 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 TMEM62Q0P6H9 643 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 GRB10Q13322 594 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 TOB2Q14106 344 aaPredicted RBP10.56□□□□□ -0.72
NUP50-206ENST00000422489 NTRK3Q16288 839 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 FAM160B1Q5W0V3 765 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 KRT40Q6A162 431 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 SWSAP1Q6NVH7 229 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 CPLX2Q6PUV4 134 aaKnown RBP10.56□□□□□ -0.72
NUP50-206ENST00000422489 NIPA1Q7RTP0 329 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 PLPPR4Q7Z2D5 763 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 CKAP2LQ8IYA6 745 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 TRIM22Q8IYM9 498 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 CCDC148Q8NFR7 591 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 TRAPPC12Q8WVT3 735 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 SYMPKQ92797 1274 aaKnown RBP10.56□□□□□ -0.72
NUP50-206ENST00000422489 RNF26Q9BY78 433 aaPredicted RBP10.56□□□□□ -0.72
NUP50-206ENST00000422489 AGXT2Q9BYV1 514 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 IFIH1Q9BYX4 1025 aaKnown RBP10.56□□□□□ -0.72
NUP50-206ENST00000422489 TCEAL9Q9UHQ7 104 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 INSL6Q9Y581 213 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 MTCH2Q9Y6C9 303 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 CDY2AQ9Y6F7 541 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 MYH6P13533 1939 aa10.56□□□□□ -0.72
NUP50-206ENST00000422489 ESYT2A0FGR8 921 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 POTEB3A0JP26 581 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 LINC01553A4QN01 128 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 IPO5O00410 1097 aaKnown RBP10.55□□□□□ -0.72
NUP50-206ENST00000422489 EPB41L2O43491 1005 aaKnown RBP10.55□□□□□ -0.72
NUP50-206ENST00000422489 ATG7O95352 703 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 CCNE2O96020 404 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 EVCP57679 992 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 PRR16Q569H4 304 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 TJAP1Q5JTD0 557 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 IER5Q5VY09 327 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 MIS18BP1Q6P0N0 1132 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 PDXDC2PQ6P474 469 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 POTEBQ6S5H4 581 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 ABHD15Q6UXT9 468 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 ATXN2LQ8WWM7 1075 aaKnown RBP10.55□□□□□ -0.72
NUP50-206ENST00000422489 ZNF274Q96GC6 653 aaPredicted RBP10.55□□□□□ -0.72
NUP50-206ENST00000422489 TGS1Q96RS0 853 aaKnown RBP10.55□□□□□ -0.72
NUP50-206ENST00000422489 YME1L1Q96TA2 773 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 TM6SF1Q9BZW5 370 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 ZNF302Q9NR11 478 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 TBC1D22BQ9NU19 505 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 THEGQ9P2T0 379 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 SAMM50Q9Y512 469 aa10.55□□□□□ -0.72
NUP50-206ENST00000422489 KIAA1217Q5T5P2 1943 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 IGLV3-22A0A075B6J6 115 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.54□□□□□ -0.72
NUP50-206ENST00000422489 MBLAC1A4D2B0 266 aaPredicted RBP10.54□□□□□ -0.72
NUP50-206ENST00000422489 M0QZ92 97 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 ENPP3O14638 875 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 DHX15O43143 795 aaKnown RBP10.54□□□□□ -0.72
NUP50-206ENST00000422489 IBSPP21815 317 aaPredicted RBP10.54□□□□□ -0.72
NUP50-206ENST00000422489 KLRC1P26715 233 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 ERVK-21P61565 698 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 MRPS5P82675 430 aaKnown RBP10.54□□□□□ -0.72
NUP50-206ENST00000422489 MRPS6P82932 125 aaKnown RBP10.54□□□□□ -0.72
NUP50-206ENST00000422489 MGAT3Q09327 533 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 LPIN1Q14693 890 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 MTHFD1LQ6UB35 978 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 RPAINQ86UA6 219 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 GDPD5Q8WTR4 605 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 APBB2Q92870 758 aa10.54□□□□□ -0.72
NUP50-206ENST00000422489 TOP1MTQ969P6 601 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms