RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 RAB3GAP1Q15042 981 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 CATSPEREQ5SY80 951 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 GPR158Q5T848 1215 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 TTLL11Q8NHH1 800 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 TSPAN17Q96FV3 270 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 AHCYL2Q96HN2 611 aaKnown RBP6.87□□□□□ -1.31
LSM5-206ENST00000409987 CHPF2Q9P2E5 772 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 KLHL14Q9P2G3 628 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 DBR1Q9UK59 544 aaKnown RBP6.87□□□□□ -1.31
LSM5-206ENST00000409987 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.86□□□□□ -1.31
LSM5-206ENST00000409987 PRAMEF25A6NGN4 478 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 ZBTB7AO95365 584 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 CYP17A1P05093 508 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 MPOP05164 745 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 SDHAP31040 664 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 EPHB1P54762 984 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 FAPQ12884 760 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 ABCB5Q2M3G0 1257 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 INAVAQ3KP66 663 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 PLEKHN1Q494U1 663 aaPredicted RBP6.86□□□□□ -1.31
LSM5-206ENST00000409987 ARTNQ5T4W7 220 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 CBLL1Q75N03 491 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 RASSF3Q86WH2 238 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 Q8N3U1 123 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 ZNF610Q8N9Z0 462 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 BCAS3Q9H6U6 928 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 TOPORSQ9NS56 1045 aaPredicted RBP6.86□□□□□ -1.31
LSM5-206ENST00000409987 C14orf119Q9NWQ9 140 aa6.86□□□□□ -1.31
LSM5-206ENST00000409987 SCO2A0A1W2PP80 73 aa6.85□□□□□ -1.31
LSM5-206ENST00000409987 PLEKHD1A6NEE1 506 aa6.85□□□□□ -1.31
LSM5-206ENST00000409987 FBXO21O94952 628 aa6.85□□□□□ -1.31
LSM5-206ENST00000409987 IARSP41252 1262 aaKnown RBP6.85□□□□□ -1.31
LSM5-206ENST00000409987 MAPKAPK2P49137 400 aa6.85□□□□□ -1.31
LSM5-206ENST00000409987 LRRC32Q14392 662 aa6.85□□□□□ -1.31
LSM5-206ENST00000409987 PAN2Q504Q3 1202 aaKnown RBP6.85□□□□□ -1.31
LSM5-206ENST00000409987 ATG4DQ86TL0 474 aaPredicted RBP6.85□□□□□ -1.31
LSM5-206ENST00000409987 CMIPQ8IY22 773 aa6.85□□□□□ -1.31
LSM5-206ENST00000409987 C16orf92Q96LL3 132 aa6.85□□□□□ -1.31
LSM5-206ENST00000409987 ZDHHC5Q9C0B5 715 aa6.85□□□□□ -1.31
LSM5-206ENST00000409987 SLC6A17Q9H1V8 727 aa6.85□□□□□ -1.31
LSM5-206ENST00000409987 OAS3Q9Y6K5 1087 aaKnown RBP6.85□□□□□ -1.31
LSM5-206ENST00000409987 FOXP2O15409 715 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 MMEP08473 750 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 TMEM253P0C7T8 217 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 FAHP16930 419 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 CD40P25942 277 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 FNTBP49356 437 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 KLF1Q13351 362 aaPredicted RBP6.84□□□□□ -1.31
LSM5-206ENST00000409987 SLC9A5Q14940 896 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 EPHA7Q15375 998 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 NFE2Q16621 373 aaPredicted RBP6.84□□□□□ -1.31
LSM5-206ENST00000409987 FMNL3Q8IVF7 1028 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 ASB15Q8WXK1 588 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 RTF1Q92541 710 aaKnown RBP6.84□□□□□ -1.31
LSM5-206ENST00000409987 CHMP4CQ96CF2 233 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 PLA2G2DQ9UNK4 145 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 NOC2LQ9Y3T9 749 aaKnown RBP6.84□□□□□ -1.31
LSM5-206ENST00000409987 SPEF1Q9Y4P9 236 aa6.84□□□□□ -1.31
LSM5-206ENST00000409987 OR14I1A6ND48 311 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 FZD9O00144 591 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 MT-CO1P00395 513 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 PDE6BP35913 854 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 RAB27AP51159 221 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 YBX1P67809 324 aaKnown RBP6.83□□□□□ -1.32
LSM5-206ENST00000409987 PDCD1Q15116 288 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 ZC3H14Q6PJT7 736 aaKnown RBP6.83□□□□□ -1.32
LSM5-206ENST00000409987 ZBTB46Q86UZ6 589 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 MIB1Q86YT6 1006 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 FAM126BQ8IXS8 530 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 DTLQ9NZJ0 730 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 TCEAL9Q9UHQ7 104 aa6.83□□□□□ -1.32
LSM5-206ENST00000409987 SHTN1A0MZ66 631 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 AKAP10O43572 662 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 KDM1AO60341 852 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 LRG1P02750 347 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 GLI1P08151 1106 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 MYBL2P10244 700 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 THBS2P35442 1172 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 SCAND1P57086 179 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 HERVK_113P62684 666 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 LRRC41Q15345 812 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 PTPN21Q16825 1174 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 IRF2BP1Q8IU81 584 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 ZZZ3Q8IYH5 903 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 LMBR1Q8WVP7 490 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 FOXRED1Q96CU9 486 aaPredicted RBP6.82□□□□□ -1.32
LSM5-206ENST00000409987 HOOK2Q96ED9 719 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 FUBP3Q96I24 572 aaKnown RBP eCLIP6.82□□□□□ -1.325e-8■■■□□ 17.6
LSM5-206ENST00000409987 ZNF496Q96IT1 587 aaPredicted RBP6.82□□□□□ -1.32
LSM5-206ENST00000409987 GBP4Q96PP9 640 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 SEMA4AQ9H3S1 761 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 AASDHPPTQ9NRN7 309 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 RIPOR2Q9Y4F9 1068 aa6.82□□□□□ -1.32
LSM5-206ENST00000409987 WASHC2AQ641Q2 1341 aa6.81□□□□□ -1.32
LSM5-206ENST00000409987 AOAHP28039 575 aa6.81□□□□□ -1.32
LSM5-206ENST00000409987 DBPQ10586 325 aaPredicted RBP6.81□□□□□ -1.32
LSM5-206ENST00000409987 PPP2R5AQ15172 486 aa6.81□□□□□ -1.32
LSM5-206ENST00000409987 KCNMB1Q16558 191 aa6.81□□□□□ -1.32
LSM5-206ENST00000409987 FRMD7Q6ZUT3 714 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms