RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 FOXP1Q9H334 677 aaPredicted RBP23.53■■□□□ 1.36
PDGFA-204ENST00000405692 IL23AQ9NPF7 189 aa23.53■■□□□ 1.36
PDGFA-204ENST00000405692 ZNF302Q9NR11 478 aa23.53■■□□□ 1.36
PDGFA-204ENST00000405692 SETD4Q9NVD3 440 aa23.53■■□□□ 1.36
PDGFA-204ENST00000405692 RRN3P2A6NIE6 340 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 TBX3O15119 743 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 MARCH6O60337 910 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 PFKMP08237 780 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 JAK3P52333 1124 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 RBL2Q08999 1139 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 PPFIA1Q13136 1202 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 SERINC5Q86VE9 423 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 RDM1Q8NG50 284 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 WNT8AQ9H1J5 351 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 TRPC6Q9Y210 931 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 UMODL1Q5DID0 1318 aa23.52■■□□□ 1.36
PDGFA-204ENST00000405692 BAG4O95429 457 aaKnown RBP23.51■■□□□ 1.35
PDGFA-204ENST00000405692 ZNF200P98182 395 aaPredicted RBP23.51■■□□□ 1.35
PDGFA-204ENST00000405692 EARS2Q5JPH6 523 aaKnown RBP23.51■■□□□ 1.35
PDGFA-204ENST00000405692 SWSAP1Q6NVH7 229 aa23.51■■□□□ 1.35
PDGFA-204ENST00000405692 PDXDC2PQ6P474 469 aa23.51■■□□□ 1.35
PDGFA-204ENST00000405692 ETNPPLQ8TBG4 499 aa23.51■■□□□ 1.35
PDGFA-204ENST00000405692 CTAGE1Q96RT6 745 aa23.51■■□□□ 1.35
PDGFA-204ENST00000405692 DISC1Q9NRI5 854 aa23.51■■□□□ 1.35
PDGFA-204ENST00000405692 SMC3Q9UQE7 1217 aa23.51■■□□□ 1.35
PDGFA-204ENST00000405692 PSMD10O75832 226 aa23.5■■□□□ 1.35
PDGFA-204ENST00000405692 RPLP2P05387 115 aaKnown RBP23.5■■□□□ 1.35
PDGFA-204ENST00000405692 IQCF3P0C7M6 154 aa23.5■■□□□ 1.35
PDGFA-204ENST00000405692 SELPP16109 830 aa23.5■■□□□ 1.35
PDGFA-204ENST00000405692 GRIK4Q16099 956 aa23.5■■□□□ 1.35
PDGFA-204ENST00000405692 LRIT3Q3SXY7 679 aa23.5■■□□□ 1.35
PDGFA-204ENST00000405692 LMBR1Q8WVP7 490 aa23.5■■□□□ 1.35
PDGFA-204ENST00000405692 MTIF3Q9H2K0 278 aaKnown RBP23.5■■□□□ 1.35
PDGFA-204ENST00000405692 POTEB3A0JP26 581 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 TREHO43280 583 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 SLC37A4O43826 429 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 HBP1O60381 514 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 CAND2O75155 1236 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 CKBP12277 381 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 PLCB4Q15147 1175 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 SHHQ15465 462 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 TAF2Q6P1X5 1199 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 POTEBQ6S5H4 581 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 LRRC8DQ7L1W4 858 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 MIER3Q7Z3K6 550 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 CCDC60Q8IWA6 550 aaPredicted RBP23.49■■□□□ 1.35
PDGFA-204ENST00000405692 CKAP2LQ8IYA6 745 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 SLFN12Q8IYM2 578 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 SCLYQ96I15 445 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 KCNMB3Q9NPA1 279 aa23.49■■□□□ 1.35
PDGFA-204ENST00000405692 FAM205CA6NFA0 338 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 CHMP2AO43633 222 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 FGBP02675 491 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 INSRRP14616 1297 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 GJB2P29033 226 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 EPHB4P54760 987 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 ADAM17P78536 824 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 HIC1Q14526 733 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 ATP8B4Q8TF62 1192 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 DHX38Q92620 1227 aaKnown RBP23.48■■□□□ 1.35
PDGFA-204ENST00000405692 FAM167AQ96KS9 214 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 RNPC3Q96LT9 517 aaKnown RBP23.48■■□□□ 1.35
PDGFA-204ENST00000405692 UNC45AQ9H3U1 944 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 GABBR1Q9UBS5 961 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 TUBE1Q9UJT0 475 aa23.48■■□□□ 1.35
PDGFA-204ENST00000405692 MAFBQ9Y5Q3 323 aaPredicted RBP23.48■■□□□ 1.35
PDGFA-204ENST00000405692 THPOP40225 353 aa23.47■■□□□ 1.35
PDGFA-204ENST00000405692 TMEM240Q5SV17 173 aa23.47■■□□□ 1.35
PDGFA-204ENST00000405692 C9orf50Q5SZB4 431 aa23.47■■□□□ 1.35
PDGFA-204ENST00000405692 RSPH3Q86UC2 560 aa23.47■■□□□ 1.35
PDGFA-204ENST00000405692 NOSTRINQ8IVI9 506 aa23.47■■□□□ 1.35
PDGFA-204ENST00000405692 BBXQ8WY36 941 aaPredicted RBP23.47■■□□□ 1.35
PDGFA-204ENST00000405692 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.47■■□□□ 1.35
PDGFA-204ENST00000405692 NOL7Q9UMY1 257 aaKnown RBP23.47■■□□□ 1.35
PDGFA-204ENST00000405692 H3BQV1 296 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 COL1A2P08123 1366 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 ACRP10323 421 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 ACTN1P12814 892 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 IGBP1P78318 339 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 PPP2R5CQ13362 524 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 ORC2Q13416 577 aaPredicted RBP23.46■■□□□ 1.35
PDGFA-204ENST00000405692 CUL4AQ13619 759 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 TRIM71Q2Q1W2 868 aaKnown RBP23.46■■□□□ 1.35
PDGFA-204ENST00000405692 ZNF484Q5JVG2 852 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 ZNF365Q70YC5 407 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 POTEDQ86YR6 584 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 CEP131Q9UPN4 1083 aa23.46■■□□□ 1.35
PDGFA-204ENST00000405692 MBLAC1A4D2B0 266 aaPredicted RBP23.45■■□□□ 1.34
PDGFA-204ENST00000405692 NEMFO60524 1076 aa23.45■■□□□ 1.34
PDGFA-204ENST00000405692 TRAPPC10P48553 1259 aa23.45■■□□□ 1.34
PDGFA-204ENST00000405692 CALCRLQ16602 461 aa23.45■■□□□ 1.34
PDGFA-204ENST00000405692 B3GNT9Q6UX72 402 aa23.45■■□□□ 1.34
PDGFA-204ENST00000405692 C16orf59Q7L2K0 433 aa23.45■■□□□ 1.34
PDGFA-204ENST00000405692 DEFB128Q7Z7B8 93 aa23.45■■□□□ 1.34
PDGFA-204ENST00000405692 RPAINQ86UA6 219 aa23.45■■□□□ 1.34
PDGFA-204ENST00000405692 GJA10Q969M2 543 aa23.45■■□□□ 1.34
PDGFA-204ENST00000405692 FTOQ9C0B1 505 aaKnown RBP eCLIP23.45■■□□□ 1.34
PDGFA-204ENST00000405692 NRBP2Q9NSY0 501 aa23.45■■□□□ 1.34
PDGFA-204ENST00000405692 IGSF9BQ9UPX0 1349 aa23.44■■□□□ 1.34
PDGFA-204ENST00000405692 RSPH10B2B2RC85 870 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms