RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PCDHB6Q9Y5E3 794 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 STK24Q9Y6E0 443 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 IGSF9BQ9UPX0 1349 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 BACH1O14867 736 aa19.89■□□□□ 0.77
CTNS-203ENST00000399306 ZSCAN22P10073 491 aaPredicted RBP19.89■□□□□ 0.77
CTNS-203ENST00000399306 FXR2P51116 673 aaKnown RBP eCLIP19.89■□□□□ 0.77
CTNS-203ENST00000399306 PTGDRQ13258 359 aa19.89■□□□□ 0.77
CTNS-203ENST00000399306 PDIA5Q14554 519 aa19.89■□□□□ 0.77
CTNS-203ENST00000399306 ARL6IP4Q66PJ3 421 aaKnown RBP19.89■□□□□ 0.77
CTNS-203ENST00000399306 CCDC60Q8IWA6 550 aaPredicted RBP19.89■□□□□ 0.77
CTNS-203ENST00000399306 NRCAMQ92823 1304 aa19.89■□□□□ 0.77
CTNS-203ENST00000399306 ATP6V0A1Q93050 837 aa19.89■□□□□ 0.77
CTNS-203ENST00000399306 ATP11BQ9Y2G3 1177 aa19.89■□□□□ 0.77
CTNS-203ENST00000399306 SAMM50Q9Y512 469 aa19.89■□□□□ 0.77
CTNS-203ENST00000399306 RRN3P2A6NIE6 340 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 HBP1O60381 514 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 CLTBP09497 229 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 ATP2C1P98194 919 aaPredicted RBP19.88■□□□□ 0.77
CTNS-203ENST00000399306 TMEM266Q2M3C6 531 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 SWSAP1Q6NVH7 229 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 PDXDC2PQ6P474 469 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 FERMT3Q86UX7 667 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 TRIM50Q86XT4 487 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 ATP8B4Q8TF62 1192 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 RAB34Q9BZG1 259 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 HDAC6Q9UBN7 1215 aa19.88■□□□□ 0.77
CTNS-203ENST00000399306 TNRC18O15417 2968 aaPredicted RBP19.88■□□□□ 0.77
CTNS-203ENST00000399306 COL1A2P08123 1366 aa19.87■□□□□ 0.77
CTNS-203ENST00000399306 KIAA0355O15063 1070 aa19.87■□□□□ 0.77
CTNS-203ENST00000399306 PQBP1O60828 265 aaKnown RBP19.87■□□□□ 0.77
CTNS-203ENST00000399306 RPLP2P05387 115 aaKnown RBP19.87■□□□□ 0.77
CTNS-203ENST00000399306 P4HBP07237 508 aaKnown RBP19.87■□□□□ 0.77
CTNS-203ENST00000399306 SMIM10L2AP0DMW4 78 aa19.87■□□□□ 0.77
CTNS-203ENST00000399306 SMIM10L2BP0DMW5 78 aa19.87■□□□□ 0.77
CTNS-203ENST00000399306 ANP32AP39687 249 aaKnown RBP19.87■□□□□ 0.77
CTNS-203ENST00000399306 TXKP42681 527 aa19.87■□□□□ 0.77
CTNS-203ENST00000399306 ADAM17P78536 824 aa19.87■□□□□ 0.77
CTNS-203ENST00000399306 FAAP100Q0VG06 881 aa19.87■□□□□ 0.77
CTNS-203ENST00000399306 ATL3Q6DD88 541 aa19.87■□□□□ 0.77
CTNS-203ENST00000399306 BBXQ8WY36 941 aaPredicted RBP19.87■□□□□ 0.77
CTNS-203ENST00000399306 GJA10Q969M2 543 aa19.87■□□□□ 0.77
CTNS-203ENST00000399306 RNPEPQ9H4A4 650 aa19.87■□□□□ 0.77
CTNS-203ENST00000399306 TRIP12Q14669 1992 aaPredicted RBP19.86■□□□□ 0.77
CTNS-203ENST00000399306 MYH15Q9Y2K3 1946 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 POTEB3A0JP26 581 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 C17orf102A2RUQ5 167 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 CHMP2AO43633 222 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 B4GALT4O60513 344 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 MUTP22033 750 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 QARSP47897 775 aaKnown RBP19.86■□□□□ 0.77
CTNS-203ENST00000399306 PSMC5P62195 406 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 RBL2Q08999 1139 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 NBR1Q14596 966 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 PLCB4Q15147 1175 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 FAM47CQ5HY64 1035 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 POTEBQ6S5H4 581 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 UIMC1Q96RL1 719 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 PDLIM7Q9NR12 457 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 GABBR1Q9UBS5 961 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 TBX21Q9UL17 535 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 CEP290O15078 2479 aa19.86■□□□□ 0.77
CTNS-203ENST00000399306 EML1O00423 815 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 LYPLA2O95372 231 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 BRD1O95696 1058 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 F13A1P00488 732 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 ATP4AP20648 1035 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 ZNF484Q5JVG2 852 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 GDF6Q6KF10 455 aaPredicted RBP19.85■□□□□ 0.77
CTNS-203ENST00000399306 IGSF22Q8N9C0 903 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 SPRYD3Q8NCJ5 442 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 HSD17B14Q9BPX1 270 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 NRBP2Q9NSY0 501 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 PRKAG2Q9UGJ0 569 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 PPME1Q9Y570 386 aa19.85■□□□□ 0.77
CTNS-203ENST00000399306 MBLAC1A4D2B0 266 aaPredicted RBP19.84■□□□□ 0.77
CTNS-203ENST00000399306 CAND2O75155 1236 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 PPFIA1Q13136 1202 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 PTK7Q13308 1070 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 PTGISQ16647 500 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 XKR3Q5GH77 459 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 NCAPH2Q6IBW4 605 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 DTHD1Q6ZMT9 781 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 RPAINQ86UA6 219 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 C4orf19Q8IY42 314 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 C7orf61Q8IZ16 206 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 KCTD17Q8N5Z5 321 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 CCDC155Q8N6L0 562 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 ERMNQ8TAM6 284 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 CAGE1Q8TC20 777 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 ZNF396Q96N95 335 aaPredicted RBP19.84■□□□□ 0.77
CTNS-203ENST00000399306 POLR3CQ9BUI4 534 aaPredicted RBP19.84■□□□□ 0.77
CTNS-203ENST00000399306 ZSWIM4Q9H7M6 989 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 TMEM39AQ9NV64 488 aa19.84■□□□□ 0.77
CTNS-203ENST00000399306 PITPNM1O00562 1244 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 SLC26A4O43511 780 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 ZNF862O60290 1169 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 OATP04181 439 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 MARK3P27448 753 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 SF3A1Q15459 793 aaKnown RBP19.83■□□□□ 0.77
CTNS-203ENST00000399306 HAUS3Q68CZ6 603 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms