RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 CWC15Q9P013 229 aaKnown RBP26.19■■□□□ 1.78
PABPN1-202ENST00000397276 SPDYE2BA6NHP3 402 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 LRRIQ3A6PVS8 624 aaPredicted RBP26.18■■□□□ 1.78
PABPN1-202ENST00000397276 SPDYE6P0CI01 402 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 ZNF662Q6ZS27 426 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 ZNF277Q9NRM2 450 aaPredicted RBP26.18■■□□□ 1.78
PABPN1-202ENST00000397276 SMCHD1A6NHR9 2005 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 NOL4O94818 638 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 MYBP10242 640 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 EPS15P42566 896 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 EN1Q05925 392 aaPredicted RBP26.18■■□□□ 1.78
PABPN1-202ENST00000397276 CTTNQ14247 550 aaKnown RBP26.18■■□□□ 1.78
PABPN1-202ENST00000397276 SLC15A2Q16348 729 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 ZNF772Q68DY9 489 aaPredicted RBP26.18■■□□□ 1.78
PABPN1-202ENST00000397276 SYT2Q8N9I0 419 aaPredicted RBP26.18■■□□□ 1.78
PABPN1-202ENST00000397276 ARHGEF10LQ9HCE6 1279 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 MAGEA1P43355 309 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 DLGAP5Q15398 846 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 BTNL9Q6UXG8 535 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 HINFPQ9BQA5 517 aa26.18■■□□□ 1.78
PABPN1-202ENST00000397276 EIF2AK1Q9BQI3 630 aaKnown RBP26.18■■□□□ 1.78
PABPN1-202ENST00000397276 POTEB2H3BUK9 544 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 ZBTB39O15060 712 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 TBX3O15119 743 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 RASSF7Q02833 373 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 LEKR1Q6ZMV7 388 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 TRIM59Q8IWR1 403 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 FAM20AQ96MK3 541 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 CEP63Q96MT8 703 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 PURBQ96QR8 312 aaKnown RBP26.17■■□□□ 1.78
PABPN1-202ENST00000397276 RUSC1Q9BVN2 902 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 TMEM39BQ9GZU3 492 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 ZNF70Q9UC06 446 aaPredicted RBP26.17■■□□□ 1.78
PABPN1-202ENST00000397276 VAV3Q9UKW4 847 aa26.17■■□□□ 1.78
PABPN1-202ENST00000397276 CETN3O15182 167 aa26.16■■□□□ 1.78
PABPN1-202ENST00000397276 LARGE2Q8N3Y3 721 aa26.16■■□□□ 1.78
PABPN1-202ENST00000397276 IPO4Q8TEX9 1081 aaKnown RBP26.16■■□□□ 1.78
PABPN1-202ENST00000397276 TSGA10Q9BZW7 698 aa26.16■■□□□ 1.78
PABPN1-202ENST00000397276 SH2D4AQ9H788 454 aa26.16■■□□□ 1.78
PABPN1-202ENST00000397276 SALL4Q9UJQ4 1053 aa26.16■■□□□ 1.78
PABPN1-202ENST00000397276 FRMD3A2A2Y4 597 aa26.16■■□□□ 1.78
PABPN1-202ENST00000397276 PDE2AO00408 941 aaPredicted RBP26.16■■□□□ 1.78
PABPN1-202ENST00000397276 SKIDA1Q1XH10 827 aa26.16■■□□□ 1.78
PABPN1-202ENST00000397276 RSBN1LQ6PCB5 846 aaPredicted RBP26.16■■□□□ 1.78
PABPN1-202ENST00000397276 TPH2Q8IWU9 490 aa26.16■■□□□ 1.78
PABPN1-202ENST00000397276 HERC5Q9UII4 1024 aaKnown RBP26.16■■□□□ 1.78
PABPN1-202ENST00000397276 PITPNM2Q9BZ72 1349 aa26.16■■□□□ 1.78
PABPN1-202ENST00000397276 BUB1O43683 1085 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 ZMYND10O75800 440 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 MMP14P50281 582 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 KCNA1Q09470 495 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 KCNH2Q12809 1159 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 HGSNATQ68CP4 663 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 OGFOD1Q8N543 542 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 SUPT20HQ8NEM7 779 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 WDR18Q9BV38 432 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 TLR2O60603 784 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 ERLIN1O75477 346 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 NAP1L1P55209 391 aaKnown RBP26.15■■□□□ 1.78
PABPN1-202ENST00000397276 GLIS2Q9BZE0 524 aaPredicted RBP26.15■■□□□ 1.78
PABPN1-202ENST00000397276 FBXO28Q9NVF7 368 aa26.15■■□□□ 1.78
PABPN1-202ENST00000397276 TACC1O75410 805 aa26.14■■□□□ 1.78
PABPN1-202ENST00000397276 POLD1P28340 1107 aa26.14■■□□□ 1.78
PABPN1-202ENST00000397276 CXCR5P32302 372 aa26.14■■□□□ 1.78
PABPN1-202ENST00000397276 CIITAP33076 1130 aa26.14■■□□□ 1.78
PABPN1-202ENST00000397276 HOXD13P35453 343 aa26.14■■□□□ 1.78
PABPN1-202ENST00000397276 SFMBT2Q5VUG0 894 aa26.14■■□□□ 1.78
PABPN1-202ENST00000397276 IKZF4Q9H2S9 585 aa26.14■■□□□ 1.78
PABPN1-202ENST00000397276 CEP72Q9P209 647 aa26.14■■□□□ 1.78
PABPN1-202ENST00000397276 ZBTB21Q9ULJ3 1066 aa26.14■■□□□ 1.78
PABPN1-202ENST00000397276 TMX2Q9Y320 296 aa26.14■■□□□ 1.78
PABPN1-202ENST00000397276 GNA14O95837 355 aa26.14■■□□□ 1.77
PABPN1-202ENST00000397276 ACTN1P12814 892 aa26.14■■□□□ 1.77
PABPN1-202ENST00000397276 RAPGEF1Q13905 1077 aa26.14■■□□□ 1.77
PABPN1-202ENST00000397276 MCTP2Q6DN12 878 aa26.14■■□□□ 1.77
PABPN1-202ENST00000397276 GDAP1L1Q96MZ0 367 aa26.14■■□□□ 1.77
PABPN1-202ENST00000397276 RABGAP1Q9Y3P9 1069 aa26.14■■□□□ 1.77
PABPN1-202ENST00000397276 CLIC2O15247 247 aa26.13■■□□□ 1.77
PABPN1-202ENST00000397276 GCNT3O95395 438 aa26.13■■□□□ 1.77
PABPN1-202ENST00000397276 HOXA7P31268 230 aaPredicted RBP26.13■■□□□ 1.77
PABPN1-202ENST00000397276 TUBB4BP68371 445 aa26.13■■□□□ 1.77
PABPN1-202ENST00000397276 KNOP1Q1ED39 458 aaKnown RBP26.13■■□□□ 1.77
PABPN1-202ENST00000397276 FOXR2Q6PJQ5 311 aa26.13■■□□□ 1.77
PABPN1-202ENST00000397276 TRIM58Q8NG06 486 aa26.13■■□□□ 1.77
PABPN1-202ENST00000397276 IGLV3-22A0A075B6J6 115 aa26.13■■□□□ 1.77
PABPN1-202ENST00000397276 RXRBP28702 533 aa26.13■■□□□ 1.77
PABPN1-202ENST00000397276 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.13■■□□□ 1.77
PABPN1-202ENST00000397276 GOPCQ9HD26 462 aa26.13■■□□□ 1.77
PABPN1-202ENST00000397276 SLC9C1Q4G0N8 1177 aa26.12■■□□□ 1.77
PABPN1-202ENST00000397276 FAM133AQ8N9E0 248 aa26.12■■□□□ 1.77
PABPN1-202ENST00000397276 FAM151AQ8WW52 585 aa26.12■■□□□ 1.77
PABPN1-202ENST00000397276 HDAC9Q9UKV0 1011 aa26.12■■□□□ 1.77
PABPN1-202ENST00000397276 NCK2O43639 380 aa26.12■■□□□ 1.77
PABPN1-202ENST00000397276 EIF3JO75822 258 aaKnown RBP26.12■■□□□ 1.77
PABPN1-202ENST00000397276 C2orf54Q08AI8 447 aa26.12■■□□□ 1.77
PABPN1-202ENST00000397276 ASTE1Q2TB18 679 aaPredicted RBP26.12■■□□□ 1.77
PABPN1-202ENST00000397276 DCAF17Q5H9S7 520 aaPredicted RBP26.12■■□□□ 1.77
PABPN1-202ENST00000397276 LRCH2Q5VUJ6 765 aa26.12■■□□□ 1.77
PABPN1-202ENST00000397276 TCERG1LQ5VWI1 586 aa26.12■■□□□ 1.77
PABPN1-202ENST00000397276 COG1Q8WTW3 980 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms