RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 HIC1Q14526 733 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 CASP8Q14790 479 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 ANKRD49Q8WVL7 239 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 EFHD2Q96C19 240 aaPredicted RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 PAG1Q9NWQ8 432 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 MORC2Q9Y6X9 1032 aaPredicted RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 DDHD2O94830 711 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 CDC27P30260 824 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 HADHAP40939 763 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 EIF2S3P41091 472 aaKnown RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 IGBP1P78318 339 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 CCNYQ8ND76 341 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 PYROXD1Q8WU10 500 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 PPP1R14AQ96A00 147 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 ZNF496Q96IT1 587 aaPredicted RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 TUBGCP2Q9BSJ2 902 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 ANKRD36BQ8N2N9 1353 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 PHLPP2Q6ZVD8 1323 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 TERF2Q15554 542 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 FAM45BPQ6NSW5 357 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 ETNK1Q9HBU6 452 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 EPN1Q9Y6I3 576 aaPredicted RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 DDX39AO00148 427 aaKnown RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 ASNA1O43681 348 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 MESDQ14696 234 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 FAM47EQ6ZV65 393 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 DZIP3Q86Y13 1208 aaKnown RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 DDI1Q8WTU0 396 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 CENPTQ96BT3 561 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 ZBTB10Q96DT7 871 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 TEX13AQ9BXU3 409 aaPredicted RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 HIC2Q96JB3 615 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 PARVAQ9NVD7 372 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 ITGB1BP2Q9UKP3 347 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 AP3B1O00203 1094 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 ATXN3P54252 364 aaPredicted RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 COPS2P61201 443 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 PNOCQ13519 176 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 SGSM1Q2NKQ1 1148 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 SLC10A5Q5PT55 438 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 VIPAS39Q9H9C1 493 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 EXOSC4Q9NPD3 245 aaKnown RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 MCM9Q9NXL9 1143 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 MYO1FO00160 1098 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 COPEO14579 308 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 MCCD1P59942 119 aaPredicted RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 NSUN2Q08J23 767 aaKnown RBP eCLIP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 EAPPQ56P03 285 aaPredicted RBP8.56□□□□□ -1.04
TRPS1-203ENST00000395715 NT5C3AQ9H0P0 336 aa8.56□□□□□ -1.04
TRPS1-203ENST00000395715 SFI1A8K8P3 1242 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 RNF103O00237 685 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 PGRMC1O00264 195 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 ARF4P18085 180 aaPredicted RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 INPP5AQ14642 412 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 DARS2Q6PI48 645 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 SCN3BQ9NY72 215 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 KIAA1468Q9P260 1216 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 SUPT6HQ7KZ85 1726 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 CASP14P31944 242 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 YWHABP31946 246 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 ATP12AP54707 1039 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 PRAMEP78395 509 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 SPATA1Q5VX52 437 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 CENPUQ71F23 418 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 RTEL1Q9NZ71 1219 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 HESX1Q9UBX0 185 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 KPNA7A9QM74 516 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 ACSL3O95573 720 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 CCT7Q99832 543 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 SETD1BQ9UPS6 1966 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 GOLGA8HP0CJ92 632 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 CHRNA2Q15822 529 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 LRRC36Q1X8D7 754 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 DAB2IPQ5VWQ8 1189 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 WDR48Q8TAF3 677 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 EME1Q96AY2 570 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 MPP4Q96JB8 637 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 FAM129BQ96TA1 746 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 SLC52A1Q9NWF4 448 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 FNDC3AQ9Y2H6 1198 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 NSD3Q9BZ95 1437 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 TBKBP1A7MCY6 615 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 CYTH3O43739 400 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 TOM1O60784 492 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 HAUS5O94927 633 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 MFN2O95140 757 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 SERPINB4P48594 390 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 CYP2J2P51589 502 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 POLR2FP61218 127 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 CUL1Q13616 776 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 OR8H2Q8N162 312 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 RASA4BC9J798 803 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 RASA4O43374 803 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 DCTN2Q13561 401 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 SLC35F6Q8N357 371 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 TTC30BQ8N4P2 665 aa8.55□□□□□ -1.04
TRPS1-203ENST00000395715 DIS3LQ8TF46 1054 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 SCG3Q8WXD2 468 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 ZC3H12CQ9C0D7 883 aaKnown RBP8.55□□□□□ -1.04
TRPS1-203ENST00000395715 MYLK2Q9H1R3 596 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms