RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 PGRMC1O00264 195 aaKnown RBP17.95■□□□□ 0.46
CNP-201ENST00000393888 CTNND1O60716 968 aaKnown RBP17.95■□□□□ 0.46
CNP-201ENST00000393888 CAND2O75155 1236 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 SKAP2O75563 359 aaPredicted RBP17.95■□□□□ 0.46
CNP-201ENST00000393888 NEBLO76041 1014 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 COPB2P35606 906 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 GNAQP50148 359 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 ELF3P78545 371 aaPredicted RBP17.95■□□□□ 0.46
CNP-201ENST00000393888 XRCC4Q13426 336 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 TCP11Q8WWU5 503 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 PSMD1Q99460 953 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 SLC24A3Q9HC58 644 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 C6orf50Q9HD87 102 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 NPHP3-ACAD11A0A0J9YXS1 232 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 NTSR2O95665 410 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 EPS15P42566 896 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 COASYQ13057 564 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 AGBL2Q5U5Z8 902 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 SYN2Q92777 582 aaPredicted RBP17.95■□□□□ 0.46
CNP-201ENST00000393888 ITGB4P16144 1822 aa17.95■□□□□ 0.46
CNP-201ENST00000393888 TLDC2A0PJX2 215 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 PALM3A6NDB9 673 aaPredicted RBP17.94■□□□□ 0.46
CNP-201ENST00000393888 F8VZ95 297 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 ATP6V1G2O95670 118 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 SHBGP04278 402 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 SLC9A1P19634 815 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 GBP2P32456 591 aaPredicted RBP17.94■□□□□ 0.46
CNP-201ENST00000393888 NAA25Q14CX7 972 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 LACTB2Q53H82 288 aaPredicted RBP17.94■□□□□ 0.46
CNP-201ENST00000393888 PIGSQ96S52 555 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 SELENOSQ9BQE4 189 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 UBA5Q9GZZ9 404 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 NUCKS1Q9H1E3 243 aaKnown RBP17.94■□□□□ 0.46
CNP-201ENST00000393888 NOD2Q9HC29 1040 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 MINPP1Q9UNW1 487 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 NR2E1Q9Y466 385 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 CLTAP09496 248 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 PPP2R5AQ15172 486 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 SOGA3Q5TF21 947 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 ACTRT1Q8TDG2 376 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 PBKQ96KB5 322 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 XPO6Q96QU8 1125 aaKnown RBP17.94■□□□□ 0.46
CNP-201ENST00000393888 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.94■□□□□ 0.462e-15■■■□□ 14.8
CNP-201ENST00000393888 GOPCQ9HD26 462 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 RIC8AQ9NPQ8 531 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 SAP30BPQ9UHR5 308 aaKnown RBP17.94■□□□□ 0.46
CNP-201ENST00000393888 GGT7Q9UJ14 662 aa17.94■□□□□ 0.46
CNP-201ENST00000393888 MGRN1O60291 552 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 TRIM37O94972 964 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 UBE4AQ14139 1066 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 ZCWPW2Q504Y3 356 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 SBK1Q52WX2 424 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 PNMA8AQ86V59 439 aaPredicted RBP17.93■□□□□ 0.46
CNP-201ENST00000393888 CCDC50Q8IVM0 306 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 LRRC57Q8N9N7 239 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 C3orf20Q8ND61 904 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 STAMBPL1Q96FJ0 436 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 CHMP6Q96FZ7 201 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 MTFR1LQ9H019 292 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 PANK4Q9NVE7 773 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 STK17AQ9UEE5 414 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 RREB1Q92766 1687 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 CCDC189A1A4V9 331 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 PPIP5K2O43314 1243 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 CHN1P15882 459 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 MRPL12P52815 198 aaKnown RBP17.93■□□□□ 0.46
CNP-201ENST00000393888 FAM133BQ5BKY9 247 aaKnown RBP17.93■□□□□ 0.46
CNP-201ENST00000393888 C12orf60Q5U649 245 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 TLDC1Q6P9B6 456 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 PEX26Q7Z412 305 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 TBC1D1Q86TI0 1168 aaPredicted RBP17.93■□□□□ 0.46
CNP-201ENST00000393888 UHMK1Q8TAS1 419 aaKnown RBP17.93■□□□□ 0.46
CNP-201ENST00000393888 THOC1Q96FV9 657 aaKnown RBP17.93■□□□□ 0.46
CNP-201ENST00000393888 MTMR9Q96QG7 549 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 GANQ9H2C0 597 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.93■□□□□ 0.466e-15■■□□□ 12.5
CNP-201ENST00000393888 AIPL1Q9NZN9 384 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 L3MBTL1Q9Y468 752 aa17.93■□□□□ 0.46
CNP-201ENST00000393888 CCT8L1PA6NM43 557 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 PAEPP09466 180 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 MTMR3Q13615 1198 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 MEX3CQ5U5Q3 659 aaKnown RBP17.92■□□□□ 0.46
CNP-201ENST00000393888 IRF2BP2Q7Z5L9 587 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 TRIM59Q8IWR1 403 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 ZNF444Q8N0Y2 327 aaPredicted RBP17.92■□□□□ 0.46
CNP-201ENST00000393888 REXO1Q8N1G1 1221 aaKnown RBP17.92■□□□□ 0.46
CNP-201ENST00000393888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.92■□□□□ 0.46
CNP-201ENST00000393888 CELF1Q92879 486 aaKnown RBP17.92■□□□□ 0.46
CNP-201ENST00000393888 DNAJC19Q96DA6 116 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 FAXDC2Q96IV6 333 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 KDM4CQ9H3R0 1056 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 ZHX3Q9H4I2 956 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 COL14A1Q05707 1796 aaKnown RBP17.92■□□□□ 0.46
CNP-201ENST00000393888 GNA11P29992 359 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 KCNH2Q12809 1159 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 ALKBH5Q6P6C2 394 aaKnown RBP17.92■□□□□ 0.46
CNP-201ENST00000393888 CCDC197Q8NCU1 140 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 TPCN2Q8NHX9 752 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 COA7Q96BR5 231 aa17.92■□□□□ 0.46
CNP-201ENST00000393888 SPAG5Q96R06 1193 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms