RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 ZNF788Q6ZQV5 615 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 CCDC84Q86UT8 332 aaPredicted RBP0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 CXorf67Q86X51 503 aaPredicted RBP0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 RIOX2Q8IUF8 465 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 ZNF513Q8N8E2 541 aaPredicted RBP0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 ARRDC4Q8NCT1 418 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 SEMA6DQ8NFY4 1073 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 MICAL1Q8TDZ2 1067 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 SLC9A6Q92581 669 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 DPF3Q92784 378 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 MYEOVQ96EZ4 313 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 TMEM176AQ96HP8 235 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 CTAGE1Q96RT6 745 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 DUSP26Q9BV47 211 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 GPR87Q9BY21 358 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 OSBPL7Q9BZF2 842 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 WDR11Q9BZH6 1224 aa0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 ERRFI1Q9UJM3 462 aaPredicted RBP0.76□□□□□ -2.29
TRAJ53-201ENST00000390485 A0A1W2PNU3 283 aaPredicted RBP0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 TCRBV5S2A0A599 114 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 FAM221AA4D161 298 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 SLC26A4O43511 780 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 NPHS1O60500 1241 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 HKR1P10072 659 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 POLR2BP30876 1174 aaKnown RBP0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 PLA2G5P39877 138 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 ETV4P43268 484 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 HGFACQ04756 655 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 C18orf65Q6ZTR6 163 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 ARHGEF19Q8IW93 802 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 C7orf61Q8IZ16 206 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 LCORLQ8N3X6 602 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 STPG3Q8N7X2 389 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 SHCBP1Q8NEM2 672 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 FBXO18Q8NFZ0 1043 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 TAF15Q92804 592 aaKnown RBP eCLIP0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 MKRN2Q9H000 416 aaKnown RBP0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 IGSF5Q9NSI5 407 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 ZFP69BQ9UJL9 534 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 PROCRQ9UNN8 238 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 BTBD3Q9Y2F9 522 aa0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 POLR3KQ9Y2Y1 108 aaPredicted RBP0.75□□□□□ -2.29
TRAJ53-201ENST00000390485 TMEM200CA6NKL6 621 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 GIPC1O14908 333 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 TBC1D4O60343 1298 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 LPXNO60711 386 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 ESRRBO95718 433 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 THBDP07204 575 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 CD3EP07766 207 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 UBTFP17480 764 aaKnown RBP0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 LAG3P18627 525 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 MPLP40238 635 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 LIG3P49916 1009 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 RRADP55042 308 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 TUBA4AP68366 448 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 SMAD3P84022 425 aaKnown RBP0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 ARHGAP4P98171 946 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 ADCY1Q08828 1119 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 TROAPQ12815 778 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 KLF9Q13886 244 aaPredicted RBP0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 ETFDHQ16134 617 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 MTX3Q5HYI7 312 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 MROH9Q5TGP6 573 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 C1QL3Q5VWW1 255 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 VASNQ6EMK4 673 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 USP30Q70CQ3 517 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 PTF1AQ7RTS3 328 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 CPNE8Q86YQ8 564 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 TMEM192Q8IY95 271 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 CMTR2Q8IYT2 770 aaKnown RBP0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 DDB2Q92466 427 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 DPF1Q92782 380 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 JARID2Q92833 1246 aaPredicted RBP0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 CAVIN3Q969G5 261 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 RPL36ALQ969Q0 106 aaKnown RBP0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 FUBP1Q96AE4 644 aaKnown RBP0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 MNTQ99583 582 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 MARCH2Q9P0N8 246 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 ICKQ9UPZ9 632 aa0.74□□□□□ -2.29
TRAJ53-201ENST00000390485 TRBV23OR9-2A0A075B6M9 112 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 ERI2A8K979 691 aaKnown RBP0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 GOLGA6L6A8MZA4 724 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 C22orf46C9J442 243 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 SUPT5HO00267 1087 aaKnown RBP0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 HGSO14964 777 aaPredicted RBP0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 AURKAO14965 403 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 SPRY2O43597 315 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 CLASP2O75122 1294 aaKnown RBP0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 TADA3O75528 432 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 IL18BPO95998 194 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 CGAP01215 116 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 SSFA2P28290 1259 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 CACNA2D1P54289 1103 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 LINC00205P59089 165 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 ZNF445P59923 1031 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 LAMB3Q13751 1172 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 SKIDA1Q1XH10 827 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 ANKRD39Q53RE8 183 aa0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 NAIF1Q69YI7 327 aaPredicted RBP0.73□□□□□ -2.29
TRAJ53-201ENST00000390485 LARP4Q71RC2 724 aaKnown RBP eCLIP0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms