RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 EFHBQ8N7U6 833 aa10.02□□□□□ -0.81
LIMCH1-202ENST00000381753 PANK4Q9NVE7 773 aa10.02□□□□□ -0.81
LIMCH1-202ENST00000381753 KIAA1024Q9UPX6 916 aa10.02□□□□□ -0.81
LIMCH1-202ENST00000381753 DAGLAQ9Y4D2 1042 aa10.02□□□□□ -0.81
LIMCH1-202ENST00000381753 ELNP15502 786 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 PTGS1P23219 599 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 ADCYAP1R1P41586 468 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 ZBTB16Q05516 673 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 MEI1Q5TIA1 1274 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 ERAP1Q9NZ08 941 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 SUCLA2Q9P2R7 463 aaPredicted RBP10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 ADGRB3O60242 1522 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 NKRFO15226 690 aaKnown RBP eCLIP10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 DDHD2O94830 711 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 CKBP12277 381 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 SFNP31947 248 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 C21orf59P57076 290 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 PPIL2Q13356 520 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 FAM43AQ8N2R8 423 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 AFAP1L2Q8N4X5 818 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 MCPH1Q8NEM0 835 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 PIK3R5Q8WYR1 880 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 KIF12Q96FN5 646 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 DNAJC7Q99615 494 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 TRIM56Q9BRZ2 755 aaKnown RBP10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 ZSWIM4Q9H7M6 989 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 FLT3LGP49771 235 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 PDE6CP51160 858 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 KIZQ2M2Z5 673 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 MYLK4Q86YV6 388 aaPredicted RBP10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 TRIML1Q8N9V2 468 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 SEPT1Q8WYJ6 367 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 MRPS27Q92552 414 aaKnown RBP10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 WNK4Q96J92 1243 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 USP26Q9BXU7 913 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 JPH1Q9HDC5 661 aaPredicted RBP10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 MAN1C1Q9NR34 630 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 MYO1AQ9UBC5 1043 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 ARHGEF40Q8TER5 1519 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 CYP2D7A0A087X1C5 515 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 THAP12O43422 761 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 EFCAB14O75071 495 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 MOCS2O96007 188 aaPredicted RBP10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 CLUL1Q15846 466 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 OR6B2Q6IFH4 312 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 PPM1KQ8N3J5 372 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 FANCBQ8NB91 859 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 RPGRIP1Q96KN7 1286 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 PCDHB6Q9Y5E3 794 aa10.01□□□□□ -0.81
LIMCH1-202ENST00000381753 FRMD3A2A2Y4 597 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 NPM3O75607 178 aaKnown RBP10□□□□□ -0.81
LIMCH1-202ENST00000381753 MAN1A1P33908 653 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 ASIC2Q16515 512 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 ITIH5Q86UX2 942 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 ATG4CQ96DT6 458 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 SPACA7Q96KW9 195 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 PCDHA6Q9UN73 950 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 PCDHA8Q9Y5H6 950 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 ADCY10Q96PN6 1610 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 ZSCAN12O43309 604 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 PRKAB2O43741 272 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 ALDH2P05091 517 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 TDRD7Q8NHU6 1098 aaKnown RBP10□□□□□ -0.81
LIMCH1-202ENST00000381753 FAM227BQ96M60 508 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 NFKBIZQ9BYH8 718 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 CKMP06732 381 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 GCFC2P16383 781 aaKnown RBP10□□□□□ -0.81
LIMCH1-202ENST00000381753 CD58P19256 250 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 HERVK_113P62684 666 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 SARNPP82979 210 aaKnown RBP10□□□□□ -0.81
LIMCH1-202ENST00000381753 PTH1RQ03431 593 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 STX1AQ16623 288 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 KYAT1Q16773 422 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 ACAP3Q96P50 834 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 MRPL9Q9BYD2 267 aaKnown RBP10□□□□□ -0.81
LIMCH1-202ENST00000381753 CTTNBP2NLQ9P2B4 639 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 FPGSQ05932 587 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 AHCYL2Q96HN2 611 aaKnown RBP10□□□□□ -0.81
LIMCH1-202ENST00000381753 FBXO10Q9UK96 956 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 MYOM2P54296 1465 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 ARL4AP40617 200 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 ZNF667Q5HYK9 610 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 RNF217Q8TC41 542 aa10□□□□□ -0.81
LIMCH1-202ENST00000381753 DDX19AQ9NUU7 478 aaKnown RBP10□□□□□ -0.81
LIMCH1-202ENST00000381753 MEIS1O00470 390 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 LDHAP00338 332 aaKnown RBP9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 GPC3P51654 580 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 CCNYQ8ND76 341 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 MAGEB10Q96LZ2 347 aaPredicted RBP9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 RIPOR3Q96MK2 946 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 CEP63Q96MT8 703 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 DSCC1Q9BVC3 393 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 GGT7Q9UJ14 662 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 CTNND2Q9UQB3 1225 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 CLASP1Q7Z460 1538 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 DISP2A7MBM2 1401 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 MED23Q9ULK4 1368 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 HMBSP08397 361 aa9.99□□□□□ -0.81
LIMCH1-202ENST00000381753 BACE1P56817 501 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms