RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TESK2Q96S53 571 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
CHD3-203ENST00000380358 OR8K1Q8NGG5 319 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 DFFAO00273 331 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 SEC24DO94855 1032 aaPredicted RBP13.36□□□□□ -0.27
CHD3-203ENST00000380358 CIITAP33076 1130 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 BBOF1Q8ND07 529 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 GIPC2Q8TF65 315 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 DYDC2Q96IM9 177 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 EPB41L5Q9HCM4 733 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 ACSL3O95573 720 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 H2AFZP0C0S5 128 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 CPB1P15086 417 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 CHRNDQ07001 517 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 H2AFVQ71UI9 128 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 DRC3Q9H069 523 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 CHCHD3Q9NX63 227 aaKnown RBP13.36□□□□□ -0.27
CHD3-203ENST00000380358 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 CLIC4Q9Y696 253 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 PNMA6EA0A0J9YXQ4 647 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 ARL13BQ3SXY8 428 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 ING2Q9H160 280 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 SPDYE5A6NIY4 337 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 PSMA2P25787 234 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 AP1B1Q10567 949 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 SPDYE7PQ495Y7 208 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 SLC17A8Q8NDX2 589 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 TNKSO95271 1327 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 SUPT20HL1Q3ZLR7 823 aa13.36□□□□□ -0.27
CHD3-203ENST00000380358 EIF2AQ9BY44 585 aaKnown RBP13.36□□□□□ -0.27
CHD3-203ENST00000380358 YTHDC2Q9H6S0 1430 aaKnown RBP13.35□□□□□ -0.27
CHD3-203ENST00000380358 KRT26Q7Z3Y9 468 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 ZNF341Q9BYN7 854 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 SEC31AO94979 1220 aaKnown RBP13.35□□□□□ -0.27
CHD3-203ENST00000380358 IMPDH2P12268 514 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 CC2D1AQ6P1N0 951 aaPredicted RBP13.35□□□□□ -0.27
CHD3-203ENST00000380358 TRIML2Q8N7C3 387 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 CCNYL1Q8N7R7 359 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 MSTO1Q9BUK6 570 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 HEMGNQ9BXL5 484 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 KCNG1Q9UIX4 513 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 TUBB4AP04350 444 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 SNCBQ16143 134 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 ALKBH2Q6NS38 261 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 VPS11Q9H270 941 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 GCNT4Q9P109 453 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 ADD3Q9UEY8 706 aaKnown RBP13.35□□□□□ -0.27
CHD3-203ENST00000380358 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
CHD3-203ENST00000380358 MED7O43513 233 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 KRT17Q04695 432 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 PLEKHM3Q6ZWE6 761 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 EFHD1Q9BUP0 239 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 MLXIPLQ9NP71 852 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 FANCLQ9NW38 375 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 LRRC53A6NM62 1247 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 STAT2P52630 851 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 LRRC24Q50LG9 513 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 FAM26FQ5R3K3 315 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 C16orf87Q6PH81 154 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 DDIASQ8IXT1 998 aa13.35□□□□□ -0.27
CHD3-203ENST00000380358 LBHD1Q9BQE6 289 aaPredicted RBP13.35□□□□□ -0.27
CHD3-203ENST00000380358 NESP48681 1621 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 TUBBP07437 444 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 TEX12Q9BXU0 123 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 SLC52A2Q9HAB3 445 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 PCDHA5Q9Y5H7 936 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 BTBD18B2RXH4 712 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 MCF2P10911 925 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 KCNA6P17658 529 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 ADORA2BP29275 332 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 ZSCAN26Q16670 478 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 ANKRD40Q6AI12 368 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 TTC23LQ6PF05 361 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 C2orf69Q8N8R5 385 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 ACCSQ96QU6 501 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 SUN2Q9UH99 717 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 SCOCQ9UIL1 159 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 TTC7AQ9ULT0 858 aaPredicted RBP13.34□□□□□ -0.27
CHD3-203ENST00000380358 A0A0G2JND7 137 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 WASHC5Q12768 1159 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 TAF11Q15544 211 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 URGCPQ8TCY9 931 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 ZFP42Q96MM3 310 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 FGFR1OP2Q9NVK5 253 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 TMEM161AQ9NX61 479 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 SUN1O94901 812 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 PSMC2P35998 433 aaKnown RBP13.34□□□□□ -0.27
CHD3-203ENST00000380358 PPARGP37231 505 aaPredicted RBP13.34□□□□□ -0.27
CHD3-203ENST00000380358 IREB2P48200 963 aaKnown RBP13.34□□□□□ -0.27
CHD3-203ENST00000380358 PEX3P56589 373 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 TSC22D1Q15714 1073 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 SLC10A5Q5PT55 438 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 TTLL11Q8NHH1 800 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 ATXN3P54252 364 aaPredicted RBP13.34□□□□□ -0.27
CHD3-203ENST00000380358 ARMCX2Q7L311 632 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
CHD3-203ENST00000380358 KRT87PA6NCN2 255 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 C21orf2O43822 256 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 NBNO60934 754 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms