RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ARAP2Q8WZ64 1704 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 NMT1P30419 496 aaKnown RBP14.19□□□□□ -0.14
USP11-204ENST00000377107 RPS6KA1Q15418 735 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 SWAP70Q9UH65 585 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 CASZ1Q86V15 1759 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 NHSL1Q5SYE7 1610 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 PTK2Q05397 1052 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 ODF2Q5BJF6 829 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 KLHDC7AQ5VTJ3 777 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 APOBEC3HQ6NTF7 200 aaKnown RBP14.18□□□□□ -0.14
USP11-204ENST00000377107 DDX42Q86XP3 938 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP11-204ENST00000377107 LRRN2O75325 713 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 GLI1P08151 1106 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 PPP4R3AQ6IN85 833 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 COL16A1Q07092 1604 aaPredicted RBP14.18□□□□□ -0.14
USP11-204ENST00000377107 PHLPP1O60346 1717 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 GAKO14976 1311 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 AFF2P51816 1311 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 IVLP07476 585 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 GABPAQ06546 454 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 TMEM119Q4V9L6 283 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 MIGA2Q7L4E1 593 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 TSEN2Q8NCE0 465 aaKnown RBP14.18□□□□□ -0.14
USP11-204ENST00000377107 BCAS4Q8TDM0 211 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 ARL8AQ96BM9 186 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 CSRNP1Q96S65 589 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 HOMER2Q9NSB8 354 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 GCNT4Q9P109 453 aa14.18□□□□□ -0.14
USP11-204ENST00000377107 CHORDC1Q9UHD1 332 aaPredicted RBP14.18□□□□□ -0.14
USP11-204ENST00000377107 FAM86B1E9PN63 330 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 NDUFB10O96000 172 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 FAM86B2P0C5J1 330 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 FAM153BP0C7A2 387 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 EPB41P11171 864 aaKnown RBP14.17□□□□□ -0.14
USP11-204ENST00000377107 GCFC2P16383 781 aaKnown RBP14.17□□□□□ -0.14
USP11-204ENST00000377107 PDCLQ13371 301 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 FAM153CQ494X1 144 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 ALKBH5Q6P6C2 394 aaKnown RBP14.17□□□□□ -0.14
USP11-204ENST00000377107 LRRC31Q6UY01 552 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 SP8Q8IXZ3 490 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 FAM153AQ9UHL3 310 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 RABGAP1Q9Y3P9 1069 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 hCG_1984214I3L0E3 225 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 TRIM49P0CI25 452 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 TRIM49CP0CI26 452 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 FIGNQ5HY92 759 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 RBM26Q5T8P6 1007 aaKnown RBP14.17□□□□□ -0.14
USP11-204ENST00000377107 DAAM2Q86T65 1068 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 IFT20Q8IY31 132 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 ZNF713Q8N859 430 aaPredicted RBP14.17□□□□□ -0.14
USP11-204ENST00000377107 BBXQ8WY36 941 aaPredicted RBP14.17□□□□□ -0.14
USP11-204ENST00000377107 FAM163AQ96GL9 167 aaPredicted RBP14.17□□□□□ -0.14
USP11-204ENST00000377107 DPH5Q9H2P9 285 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 GOPCQ9HD26 462 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 PI4KBQ9UBF8 816 aa14.17□□□□□ -0.14
USP11-204ENST00000377107 POLRMTO00411 1230 aaKnown RBP14.16□□□□□ -0.14
USP11-204ENST00000377107 NOL4O94818 638 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 AFPP02771 609 aaKnown RBP14.16□□□□□ -0.14
USP11-204ENST00000377107 ECE1P42892 770 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 CRY2Q49AN0 593 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 ARSHQ5FYA8 562 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 CPXCR1Q8N123 301 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 RUSC1Q9BVN2 902 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 RASSF4Q9H2L5 321 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 PCIF1Q9H4Z3 704 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 SMIM23A6NLE4 172 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 CHRNA5P30532 468 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 HGSNATQ68CP4 663 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 PEX26Q7Z412 305 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 DDX47Q9H0S4 455 aaKnown RBP14.16□□□□□ -0.14
USP11-204ENST00000377107 DNAJC18Q9H819 358 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 AKAP3O75969 853 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 AOC3Q16853 763 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 VPS36Q86VN1 386 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 SLFN12Q8IYM2 578 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 PROM2Q8N271 834 aa14.16□□□□□ -0.14
USP11-204ENST00000377107 QTRT2Q9H974 415 aaKnown RBP14.16□□□□□ -0.14
USP11-204ENST00000377107 NR3C1P04150 777 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 BMP3P12645 472 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 UCHL3P15374 230 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 SMARCA1P28370 1054 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 COG2Q14746 738 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 SLC18A3Q16572 532 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 KNOP1Q1ED39 458 aaKnown RBP14.15□□□□□ -0.14
USP11-204ENST00000377107 SYDE2Q5VT97 1194 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 TRIM59Q8IWR1 403 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 OR2W6PQ8NHA6 318 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 CCDC17Q96LX7 622 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 P2RX7Q99572 595 aaKnown RBP14.15□□□□□ -0.14
USP11-204ENST00000377107 CAPS2Q9BXY5 557 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 TARSL2A2RTX5 802 aaKnown RBP14.15□□□□□ -0.14
USP11-204ENST00000377107 OPA1O60313 960 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 COPB2P35606 906 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
USP11-204ENST00000377107 DHX37Q8IY37 1157 aaKnown RBP14.15□□□□□ -0.14
USP11-204ENST00000377107 UBLCP1Q8WVY7 318 aaPredicted RBP14.15□□□□□ -0.14
USP11-204ENST00000377107 DYDC2Q96IM9 177 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 EML1O00423 815 aa14.15□□□□□ -0.14
USP11-204ENST00000377107 CALUO43852 315 aaPredicted RBP14.15□□□□□ -0.14
USP11-204ENST00000377107 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms