RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 EEF1GP26641 437 aaKnown RBP11.89□□□□□ -0.51
CXCL12-203ENST00000374429 LMAN1P49257 510 aa11.89□□□□□ -0.51
CXCL12-203ENST00000374429 HAUS3Q68CZ6 603 aa11.89□□□□□ -0.51
CXCL12-203ENST00000374429 MICALL2Q8IY33 904 aa11.89□□□□□ -0.51
CXCL12-203ENST00000374429 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
CXCL12-203ENST00000374429 WRNIP1Q96S55 665 aa11.89□□□□□ -0.51
CXCL12-203ENST00000374429 PNKPQ96T60 521 aa11.89□□□□□ -0.51
CXCL12-203ENST00000374429 COL4A3BPQ9Y5P4 624 aa11.89□□□□□ -0.51
CXCL12-203ENST00000374429 BTAF1O14981 1849 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 SMCHD1A6NHR9 2005 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 PAPPAQ13219 1627 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 AHDC1Q5TGY3 1603 aaPredicted RBP11.88□□□□□ -0.51
CXCL12-203ENST00000374429 CYFIP1Q7L576 1253 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 PLCD4Q9BRC7 762 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 REXO2Q9Y3B8 237 aaKnown RBP11.88□□□□□ -0.51
CXCL12-203ENST00000374429 CAPN6Q9Y6Q1 641 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 TADA3O75528 432 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 DLATP10515 647 aaKnown RBP11.88□□□□□ -0.51
CXCL12-203ENST00000374429 TMEM132AQ24JP5 1023 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 BICD1Q96G01 975 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 C7orf25Q9BPX7 421 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 PDE11AQ9HCR9 933 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 ABCB6Q9NP58 842 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 SAR1BQ9Y6B6 198 aa11.88□□□□□ -0.51
CXCL12-203ENST00000374429 GOLGA6L9A6NEM1 432 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 GJC1P36383 396 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 HERVK_113P62684 666 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 C2CD6Q53TS8 623 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 MIER3Q7Z3K6 550 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 COG1Q8WTW3 980 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 SCFD1Q8WVM8 642 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 THAP9Q9H5L6 903 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 GINS2Q9Y248 185 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 MRFAP1Q9Y605 127 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 PDS5AQ29RF7 1337 aaKnown RBP11.87□□□□□ -0.51
CXCL12-203ENST00000374429 TNRC6CQ9HCJ0 1690 aaKnown RBP11.87□□□□□ -0.51
CXCL12-203ENST00000374429 K7ENM7 598 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 IPO5O00410 1097 aaKnown RBP11.87□□□□□ -0.51
CXCL12-203ENST00000374429 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
CXCL12-203ENST00000374429 SSR1P43307 286 aaKnown RBP11.87□□□□□ -0.51
CXCL12-203ENST00000374429 VSNL1P62760 191 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 BMS1Q14692 1282 aaKnown RBP11.87□□□□□ -0.51
CXCL12-203ENST00000374429 SAAL1Q96ER3 474 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 ARHGAP20Q9P2F6 1191 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 LAMA2P24043 3122 aaKnown RBP11.87□□□□□ -0.51
CXCL12-203ENST00000374429 GUCY2FP51841 1108 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 KRT83P78385 493 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 HLTFQ14527 1009 aaKnown RBP eCLIP11.87□□□□□ -0.51
CXCL12-203ENST00000374429 MAN2A1Q16706 1144 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 ARSHQ5FYA8 562 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 U2AF1L4Q8WU68 220 aaKnown RBP11.87□□□□□ -0.51
CXCL12-203ENST00000374429 NT5C3AQ9H0P0 336 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 TAOK3Q9H2K8 898 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 PIM2Q9P1W9 311 aa11.87□□□□□ -0.51
CXCL12-203ENST00000374429 PLSCR1O15162 318 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 OAS2P29728 719 aaKnown RBP11.86□□□□□ -0.51
CXCL12-203ENST00000374429 PRPHP41219 470 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 GMPSP49915 693 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-203ENST00000374429 SEZ6Q53EL9 994 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 DALRD3Q5D0E6 543 aaKnown RBP11.86□□□□□ -0.51
CXCL12-203ENST00000374429 XKR9Q5GH70 373 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 SFMBT2Q5VUG0 894 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 DAGLBQ8NCG7 672 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 CHURC1Q8WUH1 139 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 TAAR1Q96RJ0 339 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 LXNQ9BS40 222 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 WDR18Q9BV38 432 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 CNOT7Q9UIV1 285 aaKnown RBP11.86□□□□□ -0.51
CXCL12-203ENST00000374429 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 PCDHA13Q9Y5I0 950 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-203ENST00000374429 FGFR1OPO95684 399 aaKnown RBP11.86□□□□□ -0.51
CXCL12-203ENST00000374429 HNRNPH2P55795 449 aaKnown RBP11.86□□□□□ -0.51
CXCL12-203ENST00000374429 PEX3P56589 373 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 ZBED6P86452 979 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 GRM1Q13255 1194 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 EPC2Q52LR7 807 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 HSP90B2PQ58FF3 399 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 MUM1L1Q5H9M0 696 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 CT47A1Q5JQC4 288 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-203ENST00000374429 MIIPQ5JXC2 388 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 ANGEL2Q5VTE6 544 aaKnown RBP11.86□□□□□ -0.51
CXCL12-203ENST00000374429 ARHGEF16Q5VV41 709 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 SEPT14Q6ZU15 432 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 ZSWIM2Q8NEG5 633 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 DEFB129Q9H1M3 183 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 MYOZ2Q9NPC6 264 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 NYAP2Q9P242 653 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 MYO1AQ9UBC5 1043 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 TELO2Q9Y4R8 837 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 CEP83Q9Y592 693 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 PHLPP2Q6ZVD8 1323 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 SLC16A4O15374 487 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 MARK3P27448 753 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 GCLMP48507 274 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 HDAC7Q8WUI4 952 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 ATG4CQ96DT6 458 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms