RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 PKD2L1Q9P0L9 805 aa27.68■■■□□ 2.02
CTSA-203ENST00000372459 PAXBP1Q9Y5B6 917 aa27.68■■■□□ 2.02
CTSA-203ENST00000372459 SPDYE16A6NNV3 312 aaPredicted RBP27.67■■■□□ 2.02
CTSA-203ENST00000372459 RIOK3O14730 519 aaKnown RBP27.67■■■□□ 2.02
CTSA-203ENST00000372459 DHX15O43143 795 aaKnown RBP27.67■■■□□ 2.02
CTSA-203ENST00000372459 IREB2P48200 963 aaKnown RBP27.67■■■□□ 2.02
CTSA-203ENST00000372459 FKBP15Q5T1M5 1219 aa27.67■■■□□ 2.02
CTSA-203ENST00000372459 NELFCDQ8IXH7 590 aa27.67■■■□□ 2.02
CTSA-203ENST00000372459 ABHD10Q9NUJ1 306 aa27.67■■■□□ 2.02
CTSA-203ENST00000372459 TUBB4AP04350 444 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 GAP43P17677 238 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 ITGB3BPQ13352 177 aaPredicted RBP27.66■■■□□ 2.02
CTSA-203ENST00000372459 PPP4R3CPQ6ZMV5 832 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 C1orf186Q6ZWK4 172 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 ZNF710Q8N1W2 664 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 CEP63Q96MT8 703 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 MAF1Q9H063 256 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 KCTD10Q9H3F6 313 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 KCND2Q9NZV8 630 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 TRAF5O00463 557 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 FECHP22830 423 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 MAN2A1Q16706 1144 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 NUP58Q9BVL2 599 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 ACAD9Q9H845 621 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 WRAP73Q9P2S5 460 aaPredicted RBP27.66■■■□□ 2.02
CTSA-203ENST00000372459 PPP2R2CQ9Y2T4 447 aa27.66■■■□□ 2.02
CTSA-203ENST00000372459 PAPPA2Q9BXP8 1791 aa27.65■■■□□ 2.02
CTSA-203ENST00000372459 CTIFO43310 598 aaKnown RBP27.65■■■□□ 2.02
CTSA-203ENST00000372459 P4HBP07237 508 aaKnown RBP27.65■■■□□ 2.02
CTSA-203ENST00000372459 CCND2P30279 289 aa27.65■■■□□ 2.02
CTSA-203ENST00000372459 VWA3BQ502W6 1294 aa27.65■■■□□ 2.02
CTSA-203ENST00000372459 USP50Q70EL3 339 aaPredicted RBP27.65■■■□□ 2.02
CTSA-203ENST00000372459 L3MBTL3Q96JM7 780 aaPredicted RBP27.65■■■□□ 2.02
CTSA-203ENST00000372459 RSPH10B2B2RC85 870 aa27.64■■■□□ 2.02
CTSA-203ENST00000372459 RSPH10BP0C881 870 aa27.64■■■□□ 2.02
CTSA-203ENST00000372459 KRT9P35527 623 aa27.64■■■□□ 2.02
CTSA-203ENST00000372459 RETREG2Q8NC44 543 aa27.64■■■□□ 2.02
CTSA-203ENST00000372459 BANK1Q8NDB2 785 aa27.64■■■□□ 2.02
CTSA-203ENST00000372459 ZNF592Q92610 1267 aa27.64■■■□□ 2.02
CTSA-203ENST00000372459 PURBQ96QR8 312 aaKnown RBP27.64■■■□□ 2.02
CTSA-203ENST00000372459 ERGIC2Q96RQ1 377 aa27.64■■■□□ 2.02
CTSA-203ENST00000372459 OTOFQ9HC10 1997 aa27.64■■■□□ 2.02
CTSA-203ENST00000372459 LOXHD1Q8IVV2 1947 aa27.64■■■□□ 2.02
CTSA-203ENST00000372459 GNA14O95837 355 aa27.64■■■□□ 2.01
CTSA-203ENST00000372459 EPM2AIP1Q7L775 607 aaPredicted RBP27.64■■■□□ 2.01
CTSA-203ENST00000372459 NDST4Q9H3R1 872 aa27.64■■■□□ 2.01
CTSA-203ENST00000372459 OLFML3Q9NRN5 406 aa27.64■■■□□ 2.01
CTSA-203ENST00000372459 GOLGA6L9A6NEM1 432 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 SOWAHDA6NJG2 315 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 ZBTB39O15060 712 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 FAM13AO94988 1023 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 NF2P35240 595 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 CASP5P51878 434 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 PLS1Q14651 629 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 SYCP1Q15431 976 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 EDRF1Q3B7T1 1238 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 TOGARAM2Q6ZUX3 1019 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 REXO1L1PQ8IX06 675 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 NSUN6Q8TEA1 469 aaKnown RBP27.63■■■□□ 2.01
CTSA-203ENST00000372459 ZSWIM4Q9H7M6 989 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 MRPL44Q9H9J2 332 aaKnown RBP27.63■■■□□ 2.01
CTSA-203ENST00000372459 CAPN11Q9UMQ6 739 aa27.63■■■□□ 2.01
CTSA-203ENST00000372459 LUC7L2Q9Y383 392 aaKnown RBP27.63■■■□□ 2.01
CTSA-203ENST00000372459 TTC26A0AVF1 554 aa27.62■■■□□ 2.01
CTSA-203ENST00000372459 TESPA1A2RU30 521 aaPredicted RBP27.62■■■□□ 2.01
CTSA-203ENST00000372459 RNF225M0QZC1 329 aaPredicted RBP27.62■■■□□ 2.01
CTSA-203ENST00000372459 NR3C2P08235 984 aa27.62■■■□□ 2.01
CTSA-203ENST00000372459 VSIG10LQ86VR7 867 aa27.62■■■□□ 2.01
CTSA-203ENST00000372459 TMTC1Q8IUR5 882 aa27.62■■■□□ 2.01
CTSA-203ENST00000372459 ZC3H15Q8WU90 426 aaKnown RBP27.62■■■□□ 2.01
CTSA-203ENST00000372459 SAMM50Q9Y512 469 aa27.62■■■□□ 2.01
CTSA-203ENST00000372459 PTPRFP10586 1907 aa27.62■■■□□ 2.01
CTSA-203ENST00000372459 KNOP1Q1ED39 458 aaKnown RBP27.62■■■□□ 2.01
CTSA-203ENST00000372459 CYP39A1Q9NYL5 469 aa27.62■■■□□ 2.01
CTSA-203ENST00000372459 ARHGEF35A5YM69 484 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 NKRFO15226 690 aaKnown RBP eCLIP27.61■■■□□ 2.01
CTSA-203ENST00000372459 TRIM21P19474 475 aaKnown RBP27.61■■■□□ 2.01
CTSA-203ENST00000372459 BMT2Q1RMZ1 405 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 CCDC40Q4G0X9 1142 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 TREML2Q5T2D2 321 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 NLRX1Q86UT6 975 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 ZC3H3Q8IXZ2 948 aaKnown RBP27.61■■■□□ 2.01
CTSA-203ENST00000372459 KIF18AQ8NI77 898 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 CNKSR2Q8WXI2 1034 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 GPRASP2Q96D09 838 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 IQCDQ96DY2 449 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 PCMTD1Q96MG8 357 aaPredicted RBP27.61■■■□□ 2.01
CTSA-203ENST00000372459 PARVGQ9HBI0 331 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 TCEAL9Q9UHQ7 104 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 ODF2LQ9ULJ1 636 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 TRAF3IP3Q9Y228 551 aa27.61■■■□□ 2.01
CTSA-203ENST00000372459 MYBP10242 640 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 EPHX2P34913 555 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 PPATQ06203 517 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 CYP26C1Q6V0L0 522 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 OR8K1Q8NGG5 319 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 CDCA5Q96FF9 252 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 A1CFQ9NQ94 594 aaKnown RBP27.6■■■□□ 2.01
CTSA-203ENST00000372459 SEL1LQ9UBV2 794 aa27.6■■■□□ 2.01
CTSA-203ENST00000372459 MAFGO15525 162 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms