RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 CTSHP09668 335 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 ARP10275 920 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 MARK3P27448 753 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 PKN1Q16512 942 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 TJAP1Q5JTD0 557 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 USP38Q8NB14 1042 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 TET1Q8NFU7 2136 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 CYP2W1Q8TAV3 490 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 PPM1EQ8WY54 764 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 SLC26A6Q9BXS9 759 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 IFIH1Q9BYX4 1025 aaKnown RBP21.48■■□□□ 1.03
TMEM53-201ENST00000372235 TMEM260Q9NX78 707 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 THEGQ9P2T0 379 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 TRPC6Q9Y210 931 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 SQORQ9Y6N5 450 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 KAT6AQ92794 2004 aa21.48■■□□□ 1.03
TMEM53-201ENST00000372235 DOCK5Q9H7D0 1870 aa21.47■■□□□ 1.03
TMEM53-201ENST00000372235 IPO5O00410 1097 aaKnown RBP21.47■■□□□ 1.03
TMEM53-201ENST00000372235 SSRP1Q08945 709 aaKnown RBP21.47■■□□□ 1.03
TMEM53-201ENST00000372235 NTRK3Q16288 839 aa21.47■■□□□ 1.03
TMEM53-201ENST00000372235 AAK1Q2M2I8 961 aa21.47■■□□□ 1.03
TMEM53-201ENST00000372235 MIS18BP1Q6P0N0 1132 aa21.47■■□□□ 1.03
TMEM53-201ENST00000372235 SMAP1Q8IYB5 467 aaPredicted RBP21.47■■□□□ 1.03
TMEM53-201ENST00000372235 MYOCDQ8IZQ8 938 aa21.47■■□□□ 1.03
TMEM53-201ENST00000372235 NME8Q8N427 588 aa21.47■■□□□ 1.03
TMEM53-201ENST00000372235 ARNTL2Q8WYA1 636 aa21.47■■□□□ 1.03
TMEM53-201ENST00000372235 SAMD11Q96NU1 681 aa21.47■■□□□ 1.03
TMEM53-201ENST00000372235 TGS1Q96RS0 853 aaKnown RBP21.47■■□□□ 1.03
TMEM53-201ENST00000372235 COL25A1Q9BXS0 654 aaPredicted RBP21.47■■□□□ 1.03
TMEM53-201ENST00000372235 CDH23Q9H251 3354 aa21.47■■□□□ 1.03
TMEM53-201ENST00000372235 CDKL5O76039 1030 aa21.46■■□□□ 1.03
TMEM53-201ENST00000372235 INSRRP14616 1297 aa21.46■■□□□ 1.03
TMEM53-201ENST00000372235 IL27Q8NEV9 243 aa21.46■■□□□ 1.03
TMEM53-201ENST00000372235 CRYGNQ8WXF5 182 aa21.46■■□□□ 1.03
TMEM53-201ENST00000372235 PHKBQ93100 1093 aa21.46■■□□□ 1.03
TMEM53-201ENST00000372235 TOP1MTQ969P6 601 aa21.46■■□□□ 1.03
TMEM53-201ENST00000372235 ZNF577Q9BSK1 485 aa21.46■■□□□ 1.03
TMEM53-201ENST00000372235 TELO2Q9Y4R8 837 aa21.46■■□□□ 1.03
TMEM53-201ENST00000372235 IGKV6D-21A0A0A0MT36 114 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 POTEB3A0JP26 581 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 BACH1O14867 736 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 HBP1O60381 514 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 DEXIO95424 95 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 CIITAP33076 1130 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 USP11P51784 963 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 CCT2P78371 535 aaKnown RBP21.45■■□□□ 1.02
TMEM53-201ENST00000372235 MRPS5P82675 430 aaKnown RBP21.45■■□□□ 1.02
TMEM53-201ENST00000372235 KRT76Q01546 638 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 ITGB3BPQ13352 177 aaPredicted RBP21.45■■□□□ 1.02
TMEM53-201ENST00000372235 MKRN4PQ13434 485 aaPredicted RBP21.45■■□□□ 1.02
TMEM53-201ENST00000372235 GALNT17Q6IS24 598 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 ZNF746Q6NUN9 644 aaPredicted RBP21.45■■□□□ 1.02
TMEM53-201ENST00000372235 POTEBQ6S5H4 581 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 PCDHA2Q9Y5H9 948 aa21.45■■□□□ 1.02
TMEM53-201ENST00000372235 FAM86B1E9PN63 330 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 FAM86B2P0C5J1 330 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 NLRP5P59047 1200 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 ERVK-21P61565 698 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 IGBP1P78318 339 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 HTRA4P83105 476 aaPredicted RBP21.44■■□□□ 1.02
TMEM53-201ENST00000372235 TOB2Q14106 344 aaPredicted RBP21.44■■□□□ 1.02
TMEM53-201ENST00000372235 PLCB4Q15147 1175 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 CCDC85BQ15834 202 aaPredicted RBP21.44■■□□□ 1.02
TMEM53-201ENST00000372235 MARCH8Q5T0T0 291 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 ABHD15Q6UXT9 468 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.44■■□□□ 1.02
TMEM53-201ENST00000372235 TSHZ1Q6ZSZ6 1077 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 PCYT2Q99447 389 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 FTHL17Q9BXU8 183 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 CERS4Q9HA82 394 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 ZNF302Q9NR11 478 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 PDRG1Q9NUG6 133 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 MTCH2Q9Y6C9 303 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 COL1A2P08123 1366 aa21.44■■□□□ 1.02
TMEM53-201ENST00000372235 IGLV3-22A0A075B6J6 115 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 SMIM35A0A1B0GVV1 85 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 CHRNA1P02708 482 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 ANAPC15P60006 121 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 MRPS6P82932 125 aaKnown RBP21.43■■□□□ 1.02
TMEM53-201ENST00000372235 MGAT3Q09327 533 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 ANKRD1Q15327 319 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 TCTN1Q2MV58 587 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 ODR4Q5SWX8 454 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 RUFY4Q6ZNE9 571 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 DNAJB3Q8WWF6 145 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 YME1L1Q96TA2 773 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 RNF216Q9NWF9 866 aaPredicted RBP21.43■■□□□ 1.02
TMEM53-201ENST00000372235 COG5Q9UP83 839 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 CEP131Q9UPN4 1083 aa21.43■■□□□ 1.02
TMEM53-201ENST00000372235 LINC01553A4QN01 128 aa21.42■■□□□ 1.02
TMEM53-201ENST00000372235 PSAPP07602 524 aa21.42■■□□□ 1.02
TMEM53-201ENST00000372235 XBP1P17861 261 aa21.42■■□□□ 1.02
TMEM53-201ENST00000372235 ZNF484Q5JVG2 852 aa21.42■■□□□ 1.02
TMEM53-201ENST00000372235 PDXDC2PQ6P474 469 aa21.42■■□□□ 1.02
TMEM53-201ENST00000372235 MICALL1Q8N3F8 863 aa21.42■■□□□ 1.02
TMEM53-201ENST00000372235 SP7Q8TDD2 431 aaPredicted RBP21.42■■□□□ 1.02
TMEM53-201ENST00000372235 ATP8B4Q8TF62 1192 aa21.42■■□□□ 1.02
TMEM53-201ENST00000372235 ASB2Q96Q27 587 aa21.42■■□□□ 1.02
TMEM53-201ENST00000372235 PCDHA10Q9Y5I2 948 aa21.42■■□□□ 1.02
TMEM53-201ENST00000372235 CDY2AQ9Y6F7 541 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms