RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 WNT8BQ93098 351 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 MPP4Q96JB8 637 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 SERINC2Q96SA4 455 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PTPN18Q99952 460 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 HERPUD2Q9BSE4 406 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 OSBPL7Q9BZF2 842 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 ZNF576Q9H609 170 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 LUZP4Q9P127 313 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PPM1HQ9ULR3 514 aa4.13□□□□□ -1.75
ECHDC1-205ENST00000368295 PI4K2BG5E9Z4 385 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 EIF4EBP3O60516 100 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 RASGRP1O95267 797 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 SGPL1O95470 568 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 NPR1P16066 1061 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 EPHA1P21709 976 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 PSMA3P25788 255 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 CNGA1P29973 690 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 GRIA4P48058 902 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 ARL4DP49703 201 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 PURAQ00577 322 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 PCDH1Q08174 1060 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 SEPT2Q15019 361 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 PRRT3Q5FWE3 981 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 PRSS36Q5K4E3 855 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 SLC4A10Q6U841 1118 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 CCDC73Q6ZRK6 1079 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 ZNF354CQ86Y25 554 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 JAMLQ86YT9 394 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 DMRTC2Q8IXT2 367 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 ANKRD42Q8N9B4 389 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 RASGRP4Q8TDF6 673 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 TRIM11Q96F44 468 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 CFAP53Q96M91 514 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 DEFB118Q96PH6 123 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 CLEC4MQ9H2X3 399 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 TSPY26PQ9H489 355 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 SH2B1Q9NRF2 756 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 MCM8Q9UJA3 840 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 RIC1Q4ADV7 1423 aa4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 GCN1Q92616 2671 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-205ENST00000368295 SSC5DA1L4H1 1573 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 CGNL1Q0VF96 1302 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 WASHC2AQ641Q2 1341 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 YDJCA8MPS7 323 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 PIK3CAP42336 1068 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 HTR3AP46098 478 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 AMPHP49418 695 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 SARSP49591 514 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 MCL1Q07820 350 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 PAK2Q13177 524 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 IKBKEQ14164 716 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 ADGRE1Q14246 886 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 WDR45BQ5MNZ6 344 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 ANGEL2Q5VTE6 544 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 ANO1Q5XXA6 986 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 PPP4R3AQ6IN85 833 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 MMS22LQ6ZRQ5 1243 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 ANKS3Q6ZW76 656 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 SYNPOQ8N3V7 929 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 ZNF513Q8N8E2 541 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 ATRIPQ8WXE1 791 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 CLMNQ96JQ2 1002 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 PLVAPQ9BX97 442 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 OSGEPQ9NPF4 335 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 RNF19AQ9NV58 838 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 TMCC3Q9ULS5 477 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 ZNRF3Q9ULT6 936 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 GVINP1Q7Z2Y8 2422 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 TJP1Q07157 1748 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 COL4A6Q14031 1691 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 FAM186AA6NE01 2351 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 KTN1Q86UP2 1357 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 A0A0A0MRY4 1105 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 E2F8A0AVK6 867 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 LINC01387J3KSC0 135 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 KLF4O43474 513 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 RRP9O43818 475 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 FOSL1P15407 271 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 TSPAN7P41732 249 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 TNNT2P45379 298 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 ST5P78524 1137 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 TRIM28Q13263 835 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 KIF22Q14807 665 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 RRS1Q15050 365 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 LRRC41Q15345 812 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 VN1R5Q7Z5H4 357 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 PGBD4Q96DM1 585 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 CCDC113Q9H0I3 377 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 PRDM12Q9H4Q4 367 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 SOX17Q9H6I2 414 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 RIC8AQ9NPQ8 531 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 PLAAQ9Y263 795 aa4.11□□□□□ -1.75
ECHDC1-205ENST00000368295 CACNA1HO95180 2353 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 FAM221BA6H8Z2 402 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 C9IYK1 514 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 CHL1O00533 1208 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 TPM2P07951 284 aa4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 ESRRAP11474 423 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-205ENST00000368295 PHKG2P15735 406 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms