RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 LSG1Q9H089 658 aaKnown RBP17.25■□□□□ 0.35
COL18A1-203ENST00000359759 ZFP69BQ9UJL9 534 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 MED7O43513 233 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 ZBED1O96006 694 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 RANBP1P43487 201 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 MCTP2Q6DN12 878 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 FRA10AC1Q70Z53 315 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 CENPUQ71F23 418 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 TBCKQ8TEA7 893 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 ZNF496Q96IT1 587 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-203ENST00000359759 BEGAINQ9BUH8 593 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 NDUFA10O95299 355 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 SNAP25P60880 206 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.24■□□□□ 0.357e-7■■■■□ 26.3
COL18A1-203ENST00000359759 TLR7Q9NYK1 1049 aaKnown RBP17.24■□□□□ 0.35
COL18A1-203ENST00000359759 KIF17Q9P2E2 1029 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-203ENST00000359759 ESRRBO95718 433 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 CHRNDQ07001 517 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 SLC39A14Q15043 492 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 MIS18BP1Q6P0N0 1132 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL18A1-203ENST00000359759 MRPL47Q9HD33 250 aaKnown RBP17.24■□□□□ 0.35
COL18A1-203ENST00000359759 TBCCQ15814 346 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 EXOC4Q96A65 974 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 COA7Q96BR5 231 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 SLC12A6Q9UHW9 1150 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 ABCC12Q96J65 1359 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 CLRN2A0PK11 232 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 RWDD2AQ9UIY3 292 aa17.24■□□□□ 0.35
COL18A1-203ENST00000359759 CREB3O43889 395 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 ANP32DO95626 131 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 FBXW4P57775 412 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 DYNLL1P63167 89 aaKnown RBP17.23■□□□□ 0.35
COL18A1-203ENST00000359759 ANO4Q32M45 955 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 TTLL7Q6ZT98 887 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 TOGARAM2Q6ZUX3 1019 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 PALMDQ9NP74 551 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 ADCY2Q08462 1091 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 UBE2SQ16763 222 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 FGFR1OP2Q9NVK5 253 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 DCTN3O75935 186 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 PSMC1P62191 440 aaKnown RBP17.23■□□□□ 0.35
COL18A1-203ENST00000359759 GPR162Q16538 588 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 MTERF2Q49AM1 385 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 CEP170P1Q96L14 293 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 FOXP1Q9H334 677 aaPredicted RBP17.23■□□□□ 0.35
COL18A1-203ENST00000359759 LRRC4Q9HBW1 653 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 NUP160Q12769 1436 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 FGGP02679 453 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 GAP43P17677 238 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 NR5A1Q13285 461 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 CATSPER3Q86XQ3 398 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 TRIM55Q9BYV6 548 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 DUOX2Q9NRD8 1548 aa17.23■□□□□ 0.35
COL18A1-203ENST00000359759 SIX6OS1Q8N1H7 587 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 MAGEF1Q9HAY2 307 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 COPEO14579 308 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 PCYT1AP49585 367 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 ARMC9Q7Z3E5 817 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 FBXO18Q8NFZ0 1043 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 CCHCR1Q8TD31 782 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 HEMGNQ9BXL5 484 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 HOXB7P09629 217 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 PHKA1P46020 1223 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 PIGSQ96S52 555 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 KIFC3Q9BVG8 833 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 C19orf44Q9H6X5 657 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 KRT14P02533 472 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 ARID5BQ14865 1188 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 EEPD1Q7L9B9 569 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 ECT2Q9H8V3 914 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 SOS2Q07890 1332 aaPredicted RBP17.22■□□□□ 0.35
COL18A1-203ENST00000359759 A0A1W2PQ27 194 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 A0A1W2PQ64 194 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 A0A1W2PQD8 194 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 SFI1A8K8P3 1242 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 PALMO75781 387 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 PSMA2P25787 234 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 MDM2Q00987 491 aaPredicted RBP17.22■□□□□ 0.35
COL18A1-203ENST00000359759 LMCD1Q9NZU5 365 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 DCTN4Q9UJW0 460 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 PNMA2Q9UL42 364 aa17.22■□□□□ 0.35
COL18A1-203ENST00000359759 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 GDF11O95390 407 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 LMNAP02545 664 aaKnown RBP17.21■□□□□ 0.35
COL18A1-203ENST00000359759 MARK3P27448 753 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 STAT2P52630 851 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 ZNF589Q86UQ0 364 aaPredicted RBP17.21■□□□□ 0.35
COL18A1-203ENST00000359759 NEUROG2Q9H2A3 272 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 GGCXP38435 758 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 DRP2Q13474 957 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 SPARCL1Q14515 664 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 EPM2AIP1Q7L775 607 aaPredicted RBP17.21■□□□□ 0.35
COL18A1-203ENST00000359759 VSTM4Q8IW00 320 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 IKBKBO14920 756 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 ARHGEF9O43307 516 aa17.21■□□□□ 0.35
COL18A1-203ENST00000359759 PNMA6AP0CW24 399 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms