RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SYKP43405 635 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 LMOD3Q0VAK6 560 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 MAP3K21Q5TCX8 1036 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 LRRC47Q8N1G4 583 aaKnown RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 APPBP2Q92624 585 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 ZCWPW1Q9H0M4 648 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 ZNF395Q9H8N7 513 aaPredicted RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 ARHGEF10LQ9HCE6 1279 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 NLRC4Q9NPP4 1024 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 FSCN2O14926 492 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 OAS2P29728 719 aaKnown RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 ANGEL2Q5VTE6 544 aaKnown RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 PRPF38BQ5VTL8 546 aaKnown RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 SARM1Q6SZW1 724 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 NOSTRINQ8IVI9 506 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 LARGE2Q8N3Y3 721 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 ALG3Q92685 438 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 MRFAP1Q9Y605 127 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 BUB1O43683 1085 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 KLRC1P26715 233 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 ATP1A2P50993 1020 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 DLG4P78352 724 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 OTOP1Q7RTM1 612 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 DRC7Q8IY82 874 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 MRFAP1L1Q96HT8 127 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 FAM207AQ9NSI2 230 aaPredicted RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 CWC25Q9NXE8 425 aaPredicted RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 RGL1Q9NZL6 768 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 HRNRQ86YZ3 2850 aaPredicted RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 PLXNA3P51805 1871 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 NOP2P46087 812 aaKnown RBP6.34□□□□□ -1.4
CD47-201ENST00000355354 MASP1P48740 699 aa6.34□□□□□ -1.4
CD47-201ENST00000355354 GFPT1Q06210 699 aaPredicted RBP6.34□□□□□ -1.4
CD47-201ENST00000355354 TXNRD3NBQ6F5E7 133 aa6.34□□□□□ -1.4
CD47-201ENST00000355354 SPATA5Q8NB90 893 aa6.34□□□□□ -1.4
CD47-201ENST00000355354 RPGRQ92834 1020 aaKnown RBP6.34□□□□□ -1.4
CD47-201ENST00000355354 PRMT6Q96LA8 375 aaPredicted RBP6.34□□□□□ -1.4
CD47-201ENST00000355354 ADAM7Q9H2U9 754 aa6.34□□□□□ -1.4
CD47-201ENST00000355354 PAK6Q9NQU5 681 aaPredicted RBP6.34□□□□□ -1.4
CD47-201ENST00000355354 POLR3EQ9NVU0 708 aa6.34□□□□□ -1.4
CD47-201ENST00000355354 SLC45A1Q9Y2W3 748 aa6.34□□□□□ -1.4
CD47-201ENST00000355354 NBEAL1Q6ZS30 2694 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 ZNF233A6NK53 670 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 PATL2C9JE40 543 aaKnown RBP6.33□□□□□ -1.4
CD47-201ENST00000355354 CETPP11597 493 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 COL6A1P12109 1028 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 ZC2HC1CQ53FD0 456 aaPredicted RBP6.33□□□□□ -1.4
CD47-201ENST00000355354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.33□□□□□ -1.4
CD47-201ENST00000355354 BRI3BPQ8WY22 251 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 GLG1Q92896 1179 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 THOC1Q96FV9 657 aaKnown RBP6.33□□□□□ -1.4
CD47-201ENST00000355354 OSBPL7Q9BZF2 842 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 FAM198AQ9UFP1 575 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 BUB1BO60566 1050 aaPredicted RBP6.33□□□□□ -1.4
CD47-201ENST00000355354 EIF3JO75822 258 aaKnown RBP6.33□□□□□ -1.4
CD47-201ENST00000355354 PTPN14Q15678 1187 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 HS1BP3Q53T59 392 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 ATL3Q6DD88 541 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 KRT35Q92764 455 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 ATP2A3Q93084 1043 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 VWCEQ96DN2 955 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 CLMNQ96JQ2 1002 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 C17orf75Q9HAS0 396 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 RBM12Q9NTZ6 932 aaKnown RBP6.33□□□□□ -1.4
CD47-201ENST00000355354 IFIT3O14879 490 aaKnown RBP6.33□□□□□ -1.4
CD47-201ENST00000355354 SLC1A4P43007 532 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 GUCY1A3Q02108 690 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 FBXO46Q6PJ61 603 aaPredicted RBP6.33□□□□□ -1.4
CD47-201ENST00000355354 CTU1Q7Z7A3 348 aaKnown RBP6.33□□□□□ -1.4
CD47-201ENST00000355354 IL31RAQ8NI17 732 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 NF2P35240 595 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 TUBP50607 506 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 HP1BP3Q5SSJ5 553 aaPredicted RBP6.33□□□□□ -1.4
CD47-201ENST00000355354 SYCP2LQ5T4T6 812 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 FAM83AQ86UY5 434 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 LENG9Q96B70 501 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 CEP95Q96GE4 821 aa6.33□□□□□ -1.4
CD47-201ENST00000355354 GPR25O00155 361 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 IRF6O14896 467 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 CMA1P23946 247 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 KCNJ1P48048 391 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 TMEM67Q5HYA8 995 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 BAP1Q92560 729 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 KIFC3Q9BVG8 833 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 KAT14Q9H8E8 782 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 KIF9Q9HAQ2 790 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 A0A1B0GTH6 734 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 A0A1B0GTW7 788 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 SPDYE5A6NIY4 337 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 USP17L5A8MUK1 530 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 ZNF213O14771 459 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 FTCDO95954 541 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 TCP10Q12799 353 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.32□□□□□ -1.4
CD47-201ENST00000355354 CEP126Q9P2H0 1117 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 GUCA1BQ9UMX6 200 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.32□□□□□ -1.4
CD47-201ENST00000355354 POLQO75417 2590 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 DOK7Q18PE1 504 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms