RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 TMCO5AQ8N6Q1 288 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 ZBED2Q9BTP6 218 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 LRRC1Q9BTT6 524 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 DIABLOQ9NR28 239 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 SAMSN1Q9NSI8 373 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 PITPNM2Q9BZ72 1349 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 E9PMD0 336 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 ATP1A1P05023 1023 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 MSL3P1P0C860 447 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 KRT6CP48668 564 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 KRT79Q5XKE5 535 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 KAZNQ674X7 775 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 PASD1Q8IV76 773 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 TNIP2Q8NFZ5 429 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 MAP4K1Q92918 833 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 MMS19Q96T76 1030 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 CCT7Q99832 543 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 FAM129AQ9BZQ8 928 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 CCDC134Q9H6E4 229 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 MAPK8IP1Q9UQF2 711 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 TCHHQ07283 1943 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 H2AFZP0C0S5 128 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 RAB27AP51159 221 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 XRCC4Q13426 336 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 H2AFVQ71UI9 128 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 PALM2Q8IXS6 379 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 CAAP1Q9H8G2 361 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 TMED5Q9Y3A6 229 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 RIMS2Q9UQ26 1411 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 POTEFA5A3E0 1075 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 XPO1O14980 1071 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 ECEL1O95672 775 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 BCRP11274 1271 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 HMOX2P30519 316 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 RFC5P40937 340 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 HIC1Q14526 733 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 TSHZ1Q6ZSZ6 1077 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 RSPH3Q86UC2 560 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 NOA1Q8NC60 698 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 PPP2R3CQ969Q6 453 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 KLHL25Q9H0H3 589 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 NUP153P49790 1475 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 UBAP1LF5GYI3 381 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 CALUO43852 315 aaPredicted RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 SHOX2O60902 331 aaPredicted RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 ATP9AO75110 1047 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 OCM2P0CE71 109 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 OCMP0CE72 109 aaPredicted RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 CALB2P22676 271 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 SLCO1A2P46721 670 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 INPP1P49441 399 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 IFIT1BQ5T764 474 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 RNF169Q8NCN4 708 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 GIPC2Q8TF65 315 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 UPF3AQ9H1J1 476 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 POLE3Q9NRF9 147 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 LRP2BPQ9P2M1 347 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 RPL26L1Q9UNX3 145 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 MYOM2P54296 1465 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 EXOC1LA0A1B0GW35 172 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 SERPING1P05155 500 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 CA4P22748 312 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 STAT1P42224 750 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 ZNF658Q5TYW1 1059 aaPredicted RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 ZNF772Q68DY9 489 aaPredicted RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 KCNH5Q8NCM2 988 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 STK32AQ8WU08 396 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 VPS50Q96JG6 964 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 TRIM15Q9C019 465 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 AZI2Q9H6S1 392 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 HDAC6Q9UBN7 1215 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 ZMYM6O95789 1325 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 CCDC88CQ9P219 2028 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 CAPN9O14815 690 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 DEFA1P59665 94 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 DEFA3P59666 94 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 RSBN1LQ6PCB5 846 aaPredicted RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 KIF6Q6ZMV9 814 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 TRAPPC11Q7Z392 1133 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 KIF2BQ8N4N8 673 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 MRPL44Q9H9J2 332 aaKnown RBP5.41□□□□□ -1.54
SKP1-202ENST00000353411 SLC39A2Q9NP94 309 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 FBXL5Q9UKA1 691 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 ARHGAP26Q9UNA1 814 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 CNTRLQ7Z7A1 2325 aa5.41□□□□□ -1.54
SKP1-202ENST00000353411 A8MXQ7 604 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 NBPF26B4DH59 902 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 RPN1P04843 607 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 POTEIP0CG38 1075 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 PPM1FP49593 454 aaPredicted RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 TMED2Q15363 201 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 TTC38Q5R3I4 469 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 POTEAQ6S8J7 498 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 TSPYL6Q8N831 410 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 RAPGEF5Q92565 580 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 TTC25Q96NG3 672 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 RPS6KC1Q96S38 1066 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 HBS1LQ9Y450 684 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 RASA4BC9J798 803 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 RASA4O43374 803 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms