RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PDZD4Q76G19 769 aaPredicted RBP17.33■□□□□ 0.36
PTPN11-201ENST00000351677 CFAP57Q96MR6 1250 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 NFU1Q9UMS0 254 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 CRB1P82279 1406 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 ALX1Q15699 326 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 CCDC197Q8NCU1 140 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 ALDH8A1Q9H2A2 487 aaPredicted RBP17.33■□□□□ 0.36
PTPN11-201ENST00000351677 ADGRB3O60242 1522 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 VGLL3A8MV65 326 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 DNAJC24Q6P3W2 148 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 DPP9Q86TI2 863 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 SFR1Q86XK3 245 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.33■□□□□ 0.36
PTPN11-201ENST00000351677 PALMO75781 387 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 BAG2O95816 211 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 IL9RQ01113 521 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 NUF2Q9BZD4 464 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 CEP152O94986 1710 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 FAM160B2Q86V87 743 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 RAD54LQ92698 747 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 LRRC53A6NM62 1247 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 SUN1O94901 812 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 SCARA5Q6ZMJ2 495 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 RRP15Q9Y3B9 282 aaKnown RBP17.32■□□□□ 0.36
PTPN11-201ENST00000351677 HIP1RO75146 1068 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 DR1Q01658 176 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 FAM149B1Q96BN6 582 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 NOVA2Q9UNW9 492 aaKnown RBP17.32■□□□□ 0.36
PTPN11-201ENST00000351677 GRM4Q14833 912 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 FAM83BQ5T0W9 1011 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 DCAF4Q8WV16 495 aa17.32■□□□□ 0.36
PTPN11-201ENST00000351677 GFPT1Q06210 699 aaPredicted RBP17.31■□□□□ 0.36
PTPN11-201ENST00000351677 RPS6KA2Q15349 733 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 CCDC93Q567U6 631 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 PDXDC2PQ6P474 469 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 BANK1Q8NDB2 785 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 VCXQ9H320 206 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 HAUS2Q9NVX0 235 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 ADD3Q9UEY8 706 aaKnown RBP17.31■□□□□ 0.36
PTPN11-201ENST00000351677 CTNND1O60716 968 aaKnown RBP17.31■□□□□ 0.36
PTPN11-201ENST00000351677 PSAPP07602 524 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 NAA30Q147X3 362 aaPredicted RBP17.31■□□□□ 0.36
PTPN11-201ENST00000351677 TSGA10IPQ3SY00 556 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 DNAJC17Q9NVM6 304 aaKnown RBP17.31■□□□□ 0.36
PTPN11-201ENST00000351677 EXOSC10Q01780 885 aaKnown RBP17.31■□□□□ 0.36
PTPN11-201ENST00000351677 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPN11-201ENST00000351677 CDHR1Q96JP9 859 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 OSBPL5Q9H0X9 879 aaPredicted RBP17.31■□□□□ 0.36
PTPN11-201ENST00000351677 TDRD3Q9H7E2 651 aaKnown RBP17.31■□□□□ 0.36
PTPN11-201ENST00000351677 MRPL47Q9HD33 250 aaKnown RBP17.31■□□□□ 0.36
PTPN11-201ENST00000351677 POTEB3A0JP26 581 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 POTECB2RU33 542 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 AP3B2Q13367 1082 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 Q3C1V9 767 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 POTEBQ6S5H4 581 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 CALN1Q9BXU9 219 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 UTYO14607 1347 aa17.31■□□□□ 0.36
PTPN11-201ENST00000351677 ZNF609O15014 1411 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 MARK3P27448 753 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 PDLIM2Q96JY6 352 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 DNAJC12Q9UKB3 198 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 C21orf2O43822 256 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 SRGAP2CP0DJJ0 459 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 COASYQ13057 564 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 C7orf31Q8N865 590 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 MASTLQ96GX5 879 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 SPZ1Q9BXG8 430 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 FGGP02679 453 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 FMO2Q99518 471 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 MROH7-TTC4A0A0A0MT08 1334 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 BASP1P80723 227 aaKnown RBP17.3■□□□□ 0.36
PTPN11-201ENST00000351677 MAGED2Q9UNF1 606 aaPredicted RBP17.3■□□□□ 0.36
PTPN11-201ENST00000351677 PDE1BQ01064 536 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 RABL6Q3YEC7 729 aaPredicted RBP17.3■□□□□ 0.36
PTPN11-201ENST00000351677 STAG2Q8N3U4 1231 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 CDKL2Q92772 493 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 BARHL2Q9NY43 387 aa17.3■□□□□ 0.36
PTPN11-201ENST00000351677 GPR162Q16538 588 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 SGMS1Q86VZ5 419 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 CFAP61Q8NHU2 1237 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 FAM84BQ96KN1 310 aaPredicted RBP17.29■□□□□ 0.36
PTPN11-201ENST00000351677 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
PTPN11-201ENST00000351677 CEP72Q9P209 647 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 SETBP1Q9Y6X0 1596 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 RCAN1P53805 252 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 RPS6KC1Q96S38 1066 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 LRRD1A4D1F6 860 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
PTPN11-201ENST00000351677 WHAMMQ8TF30 809 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 JPH2Q9BR39 696 aaPredicted RBP17.29■□□□□ 0.36
PTPN11-201ENST00000351677 SMYD2Q9NRG4 433 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 USP31Q70CQ4 1352 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 MCF2LO15068 1137 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 NR3C1P04150 777 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 KCTD6Q8NC69 237 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 GSDMBQ8TAX9 411 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 MICAL1Q8TDZ2 1067 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 FAM81BQ96LP2 452 aa17.29■□□□□ 0.36
PTPN11-201ENST00000351677 NUB1Q9Y5A7 615 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms