RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 USP17L13C9JLJ4 530 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 USP17L11C9JVI0 530 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 USP17L18D6R9N7 530 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 USP17L22D6RA61 530 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 USP17L17D6RBQ6 530 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 USP17L19D6RCP7 530 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 USP17L20D6RJB6 530 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 YARSP54577 528 aaKnown RBP17.05■□□□□ 0.32
HDAC5-202ENST00000336057 USP17L24Q0WX57 530 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 NR1I3Q14994 352 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 SNCBQ16143 134 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 USP17L6PQ6QN14 398 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 RHOT2Q8IXI1 618 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 LRRC8CQ8TDW0 803 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 MIS12Q9H081 205 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 HPS5Q9UPZ3 1129 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 GGCXP38435 758 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 ALCAMQ13740 583 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 PPP2R5DQ14738 602 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 LLGL1Q15334 1064 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 PLCD3Q8N3E9 789 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
HDAC5-202ENST00000336057 CEP170P1Q96L14 293 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
HDAC5-202ENST00000336057 PCDHA6Q9UN73 950 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 PCDHA8Q9Y5H6 950 aa17.05■□□□□ 0.32
HDAC5-202ENST00000336057 C1orf167Q5SNV9 1468 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 SARNPP82979 210 aaKnown RBP17.04■□□□□ 0.32
HDAC5-202ENST00000336057 NEURL4Q96JN8 1562 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 POC1B-GALNT4F8VUJ3 575 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 CTIFO43310 598 aaKnown RBP17.04■□□□□ 0.32
HDAC5-202ENST00000336057 NR3C1P04150 777 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 NEDD1Q8NHV4 660 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 SENP2Q9HC62 589 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 CEP170BQ9Y4F5 1589 aaPredicted RBP17.04■□□□□ 0.32
HDAC5-202ENST00000336057 TMOD1P28289 359 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 SNAP25P60880 206 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 BSPRYQ5W0U4 402 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 NFRKBQ6P4R8 1299 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 EPB41L4AQ9HCS5 686 aaPredicted RBP17.04■□□□□ 0.32
HDAC5-202ENST00000336057 PLEKHG2Q9H7P9 1386 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 DIP2AQ14689 1571 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 FCER1AP12319 257 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 C12orf60Q5U649 245 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 USP49Q70CQ1 688 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 TC2NQ8N9U0 490 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 GABPB2Q8TAK5 448 aaPredicted RBP17.04■□□□□ 0.32
HDAC5-202ENST00000336057 SLC7A3Q8WY07 619 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 HAUS1Q96CS2 278 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 ANAPC5Q9UJX4 755 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 DNAJC12Q9UKB3 198 aa17.04■□□□□ 0.32
HDAC5-202ENST00000336057 TECPR2O15040 1411 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 PIGOQ8TEQ8 1089 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 POTEB3A0JP26 581 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 POTECB2RU33 542 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 USP17L10C9JJH3 530 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 ATP1A1P05023 1023 aaKnown RBP17.03■□□□□ 0.32
HDAC5-202ENST00000336057 POTEBQ6S5H4 581 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 GSPT2Q8IYD1 628 aaKnown RBP17.03■□□□□ 0.32
HDAC5-202ENST00000336057 PAGR1Q9BTK6 254 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 ZMYND12Q9H0C1 365 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 PLAAQ9Y263 795 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 RASGRF2O14827 1237 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 SLCO1A2P46721 670 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 GEN1Q17RS7 908 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 ANKRD40Q6AI12 368 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 RASGRP2Q7LDG7 609 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 FAM160B2Q86V87 743 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 ZNF34Q8IZ26 560 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 TAB3Q8N5C8 712 aaPredicted RBP17.03■□□□□ 0.32
HDAC5-202ENST00000336057 SMC1BQ8NDV3 1235 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 MRPL47Q9HD33 250 aaKnown RBP17.03■□□□□ 0.32
HDAC5-202ENST00000336057 TRPC5Q9UL62 973 aaPredicted RBP17.03■□□□□ 0.32
HDAC5-202ENST00000336057 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.03■□□□□ 0.32
HDAC5-202ENST00000336057 ADSSL1Q8N142 457 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 FAM20AQ96MK3 541 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 MMS19Q96T76 1030 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 TRIM9Q9C026 710 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 ITIH6Q6UXX5 1313 aa17.03■□□□□ 0.32
HDAC5-202ENST00000336057 TDP2O95551 362 aa17.02■□□□□ 0.32
HDAC5-202ENST00000336057 NPR1P16066 1061 aa17.02■□□□□ 0.32
HDAC5-202ENST00000336057 PPP1R2P3Q6NXS1 205 aa17.02■□□□□ 0.32
HDAC5-202ENST00000336057 DIS3Q9Y2L1 958 aaKnown RBP17.02■□□□□ 0.32
HDAC5-202ENST00000336057 CSADQ9Y600 493 aa17.02■□□□□ 0.32
HDAC5-202ENST00000336057 MAP2P11137 1827 aaKnown RBP17.02■□□□□ 0.32
HDAC5-202ENST00000336057 ARHGAP4P98171 946 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 FAM160B1Q5W0V3 765 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 CYP4F22Q6NT55 531 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 FUCA2Q9BTY2 467 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 VCXQ9H320 206 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 VCX3BQ9H321 246 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 SGK1O00141 431 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 FXR1P51114 621 aaKnown RBP eCLIP17.02■□□□□ 0.31
HDAC5-202ENST00000336057 PDCLQ13371 301 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 KNOP1Q1ED39 458 aaKnown RBP17.02■□□□□ 0.31
HDAC5-202ENST00000336057 NYAP1Q6ZVC0 841 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 CHP1Q99653 195 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 EDEM3Q9BZQ6 932 aa17.02■□□□□ 0.31
HDAC5-202ENST00000336057 HESX1Q9UBX0 185 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms