RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 CCDC148Q8NFR7 591 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 SH3GL2Q99962 352 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 KIAA1683Q9H0B3 1180 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 KIAA0100Q14667 2235 aaKnown RBP11.38□□□□□ -0.59
ABCF1-201ENST00000326195 LAMA4Q16363 1823 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 SPDYE5A6NIY4 337 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 COBLO75128 1261 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 CEP57Q86XR8 500 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 SH2D3CQ8N5H7 860 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 PTPN18Q99952 460 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 AMNQ9BXJ7 453 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 NDUFAB1O14561 156 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 MEFVO15553 781 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-201ENST00000326195 RTN2O75298 545 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 PTPREP23469 700 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 ATP1A2P50993 1020 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 SETQ01105 290 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-201ENST00000326195 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 TTC38Q5R3I4 469 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 SPRYD7Q5W111 196 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 CEP120Q8N960 986 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 CAPNS2Q96L46 248 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 PANX2Q96RD6 677 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 CRACR2AQ9BSW2 395 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 MAGEC2Q9UBF1 373 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-201ENST00000326195 SSBP05455 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
ABCF1-201ENST00000326195 CCT6AP40227 531 aaKnown RBP11.37□□□□□ -0.59
ABCF1-201ENST00000326195 STAT3P40763 770 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 PPATQ06203 517 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 SPRED3Q2MJR0 410 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 WLSQ5T9L3 541 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 HDAC7Q8WUI4 952 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.37□□□□□ -0.59
ABCF1-201ENST00000326195 RNF146Q9NTX7 359 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 ZNF112Q9UJU3 913 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-201ENST00000326195 STK36Q9NRP7 1315 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 SMCHD1A6NHR9 2005 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 GOLGA6BA6NDN3 693 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 WNT7AO00755 349 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 ZNF185O15231 689 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 PRPF3O43395 683 aaKnown RBP11.37□□□□□ -0.59
ABCF1-201ENST00000326195 HERVK_113P62684 666 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 MDM2Q00987 491 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-201ENST00000326195 FUT2Q10981 343 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 TMEM132BQ14DG7 1078 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 PTPAQ15257 358 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 TTMPQ5BVD1 217 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 PPP1R13LQ8WUF5 828 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 DCAF4Q8WV16 495 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 RNF26Q9BY78 433 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-201ENST00000326195 MAPK8IP1Q9UQF2 711 aa11.37□□□□□ -0.59
ABCF1-201ENST00000326195 MYH8P13535 1937 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 PNMA6FA0A0J9YX94 578 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 IGF2BP3O00425 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 ZEB2O60315 1214 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 RASSF9O75901 435 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 ATP1A1P05023 1023 aaKnown RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 RDXP35241 583 aaKnown RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 UBA7P41226 1012 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 ADCY7P51828 1080 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 BAATQ14032 418 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 PFKFB3Q16875 520 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 KCTD16Q68DU8 428 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 CCNI2Q6ZMN8 369 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 MKL1Q969V6 931 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 CTAGE1Q96RT6 745 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 PORCNQ9H237 461 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 BTBD7Q9P203 1132 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 HTTP42858 3142 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 SYNRGQ9UMZ2 1314 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 NAV1Q8NEY1 1877 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 PDE2AO00408 941 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 WDR46O15213 610 aaKnown RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 CHMP2AO43633 222 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 CNTN2Q02246 1040 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 GRIN1Q05586 938 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 E2F5Q15329 346 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 CYP2W1Q8TAV3 490 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 EPSTI1Q96J88 318 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 C6orf50Q9HD87 102 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 SRPRBQ9Y5M8 271 aaKnown RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 A0A1B0GTH6 734 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 SPDYE3A6NKU9 549 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 SPDYE16A6NNV3 312 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 VWA5AO00534 786 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 GYPCP04921 128 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 RPSAP08865 295 aaKnown RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 LDLRAD1Q5T700 205 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 BLIDQ8IZY5 108 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 REXO1Q8N1G1 1221 aaKnown RBP11.36□□□□□ -0.59
ABCF1-201ENST00000326195 BLZF1Q9H2G9 400 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 PPP1R9AQ9ULJ8 1098 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 GUCA1BQ9UMX6 200 aa11.36□□□□□ -0.59
ABCF1-201ENST00000326195 TIAM2Q8IVF5 1701 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 LAMA2P24043 3122 aaKnown RBP11.35□□□□□ -0.59
ABCF1-201ENST00000326195 CCNT1O60563 726 aaKnown RBP11.35□□□□□ -0.59
ABCF1-201ENST00000326195 STAT6P42226 847 aa11.35□□□□□ -0.59
ABCF1-201ENST00000326195 SEC24CP53992 1094 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms