RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 MOXD1Q6UVY6 613 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 SLC35F6Q8N357 371 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 SNX29Q8TEQ0 813 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 CLEC4DQ8WXI8 215 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 BRI3BPQ8WY22 251 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 RAD54LQ92698 747 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 ATG4CQ96DT6 458 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 MBOAT7Q96N66 472 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 PNMA5Q96PV4 448 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 ZIC5Q96T25 663 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 BLOC1S4Q9NUP1 217 aa15.72■□□□□ 0.11
VRK3-201ENST00000316763 SPDYE3A6NKU9 549 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 GCOM1H8Y6P7 765 aaPredicted RBP15.71■□□□□ 0.11
VRK3-201ENST00000316763 POLR2MP0CAP2 368 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 HOXA13P31271 388 aaPredicted RBP15.71■□□□□ 0.11
VRK3-201ENST00000316763 CYLC1P35663 651 aaPredicted RBP15.71■□□□□ 0.11
VRK3-201ENST00000316763 CHMP4BP1P59074 171 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 CENPPQ6IPU0 288 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 TBC1D5Q92609 795 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 CAPNS2Q96L46 248 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 PCMTD1Q96MG8 357 aaPredicted RBP15.71■□□□□ 0.11
VRK3-201ENST00000316763 CHP1Q99653 195 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 HAUS4Q9H6D7 363 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 RAVER2Q9HCJ3 691 aaKnown RBP15.71■□□□□ 0.11
VRK3-201ENST00000316763 DDX25Q9UHL0 483 aaKnown RBP15.71■□□□□ 0.11
VRK3-201ENST00000316763 PARP14Q460N5 1801 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 RLFQ13129 1914 aa15.71■□□□□ 0.11
VRK3-201ENST00000316763 SMCHD1A6NHR9 2005 aa15.71■□□□□ 0.1
VRK3-201ENST00000316763 MYMKA6NI61 221 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 ATP2A1O14983 1001 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 HSD17B4P51659 736 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 OAZ1P54368 228 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 ZBED6P86452 979 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 ARHGAP4P98171 946 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 PTPN18Q99952 460 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 SLC39A2Q9NP94 309 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 AGTPBP1Q9UPW5 1226 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 MYH7BA7E2Y1 1941 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 A0A0U1RQJ8 604 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 TESPA1A2RU30 521 aaPredicted RBP15.7■□□□□ 0.1
VRK3-201ENST00000316763 MANSC4A6NHS7 340 aaPredicted RBP15.7■□□□□ 0.1
VRK3-201ENST00000316763 SLC26A4O43511 780 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 IPO7O95373 1038 aaKnown RBP15.7■□□□□ 0.1
VRK3-201ENST00000316763 CFBP00751 764 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 HSPA6P17066 643 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 ARHGAP25P42331 645 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 MEA1Q16626 185 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 WHAMMP3Q1A5X7 153 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 TMEM119Q4V9L6 283 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 FIGNQ5HY92 759 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 CCDC170Q8IYT3 715 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 CPXCR1Q8N123 301 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 GUF1Q8N442 669 aaKnown RBP15.7■□□□□ 0.1
VRK3-201ENST00000316763 SAMD3Q8N6K7 520 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 KIAA0895Q8NCT3 520 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 ATRIPQ8WXE1 791 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 ERGIC2Q96RQ1 377 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 HOXC10Q9NYD6 342 aa15.7■□□□□ 0.1
VRK3-201ENST00000316763 KDM3AQ9Y4C1 1321 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 A0A1W2PQJ5 194 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 POTEMA6NI47 508 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 BTBD19C9JJ37 291 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 AOC2O75106 756 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 ZRANB2O95218 330 aaKnown RBP eCLIP15.69■□□□□ 0.1
VRK3-201ENST00000316763 CYP3A4P08684 503 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 PNMA6AP0CW24 399 aaPredicted RBP15.69■□□□□ 0.1
VRK3-201ENST00000316763 CIITAP33076 1130 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 LRRC63Q05C16 580 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 MCF2L2Q86YR7 1114 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 EHBP1Q8NDI1 1231 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 TSG101Q99816 390 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 NT5C3AQ9H0P0 336 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 SEMA6BQ9H3T3 888 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 BMP2KQ9NSY1 1161 aaPredicted RBP15.69■□□□□ 0.1
VRK3-201ENST00000316763 MAP3K20Q9NYL2 800 aaKnown RBP15.69■□□□□ 0.1
VRK3-201ENST00000316763 ZNF214Q9UL59 606 aaPredicted RBP15.69■□□□□ 0.1
VRK3-201ENST00000316763 FHOD1Q9Y613 1164 aa15.69■□□□□ 0.1
VRK3-201ENST00000316763 SPDYE16A6NNV3 312 aaPredicted RBP15.68■□□□□ 0.1
VRK3-201ENST00000316763 NFIBO00712 420 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 NOGQ13253 232 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 FOXR2Q6PJQ5 311 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 ZNF662Q6ZS27 426 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 DYMQ7RTS9 669 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 TTYH3Q9C0H2 523 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 CTDP1Q9Y5B0 961 aaPredicted RBP15.68■□□□□ 0.1
VRK3-201ENST00000316763 ALAS1P13196 640 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 IDEP14735 1019 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 VEGFBP49765 207 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 INHBEP58166 350 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 MIIPQ5JXC2 388 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 ANKRD23Q86SG2 305 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 KIAA1328Q86T90 577 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 DDX12PQ92771 950 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 HAS1Q92839 578 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 PARD6BQ9BYG5 372 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 ARFGAP3Q9NP61 516 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 KCNMB3Q9NPA1 279 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 GUCA1BQ9UMX6 200 aa15.68■□□□□ 0.1
VRK3-201ENST00000316763 PCDHA12Q9UN75 941 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms