RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 C3orf20Q8ND61 904 aa17.75■□□□□ 0.43
CCDC8-201ENST00000307522 COA7Q96BR5 231 aa17.75■□□□□ 0.43
CCDC8-201ENST00000307522 ELAC2Q9BQ52 826 aaKnown RBP17.75■□□□□ 0.43
CCDC8-201ENST00000307522 KANSL2Q9H9L4 492 aa17.75■□□□□ 0.43
CCDC8-201ENST00000307522 NLRC4Q9NPP4 1024 aa17.75■□□□□ 0.43
CCDC8-201ENST00000307522 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCDC8-201ENST00000307522 ANAPC4Q9UJX5 808 aa17.75■□□□□ 0.43
CCDC8-201ENST00000307522 WDR19Q8NEZ3 1342 aa17.75■□□□□ 0.43
CCDC8-201ENST00000307522 COL5A3P25940 1745 aaPredicted RBP17.75■□□□□ 0.43
CCDC8-201ENST00000307522 SEMA3EO15041 775 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 BBOX1O75936 387 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 PDHA1P08559 390 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 KRT71Q3SY84 523 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 CCT6BQ92526 530 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 WASF1Q92558 559 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 TMBIM4Q9HC24 238 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 PYGLP06737 847 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 ZNF844Q08AG5 666 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 CDC37Q16543 378 aaPredicted RBP17.74■□□□□ 0.43
CCDC8-201ENST00000307522 TTBK2Q6IQ55 1244 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 KCTD1Q719H9 257 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 CCDC170Q8IYT3 715 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 ALS2CR12Q96Q35 445 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 CCDC113Q9H0I3 377 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 TMX4Q9H1E5 349 aaPredicted RBP17.74■□□□□ 0.43
CCDC8-201ENST00000307522 EXOC1Q9NV70 894 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 CEP131Q9UPN4 1083 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 KLRF2D3W0D1 207 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 SCG2P13521 617 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 RXRBP28702 533 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 RHBDL3P58872 404 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 ZNF507Q8TCN5 953 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 NOC4LQ9BVI4 516 aaKnown RBP17.74■□□□□ 0.43
CCDC8-201ENST00000307522 DPH5Q9H2P9 285 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 ABCF3Q9NUQ8 709 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 FBXL5Q9UKA1 691 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 PNMA2Q9UL42 364 aa17.74■□□□□ 0.43
CCDC8-201ENST00000307522 HMGB1P1B2RPK0 211 aaPredicted RBP17.73■□□□□ 0.43
CCDC8-201ENST00000307522 EVI5O60447 810 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 SHBGP04278 402 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 ERVK-9P63128 1117 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 XRCC4Q13426 336 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 IL17AQ16552 155 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 CDCA2Q69YH5 1023 aaPredicted RBP17.73■□□□□ 0.43
CCDC8-201ENST00000307522 POTEAQ6S8J7 498 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 TMEM260Q9NX78 707 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 BIN2Q9UBW5 565 aaPredicted RBP17.73■□□□□ 0.43
CCDC8-201ENST00000307522 SLC12A6Q9UHW9 1150 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 CLRN2A0PK11 232 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 PALMO75781 387 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 RAD17O75943 681 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 GDF11O95390 407 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 XBP1P17861 261 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 SLC27A3Q5K4L6 730 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 KLHDC7AQ5VTJ3 777 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 MIS18BP1Q6P0N0 1132 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 ADAT2Q7Z6V5 191 aaKnown RBP17.73■□□□□ 0.43
CCDC8-201ENST00000307522 ZNF579Q8NAF0 562 aaKnown RBP17.73■□□□□ 0.43
CCDC8-201ENST00000307522 FOXP1Q9H334 677 aaPredicted RBP17.73■□□□□ 0.43
CCDC8-201ENST00000307522 MLXIPLQ9NP71 852 aa17.73■□□□□ 0.43
CCDC8-201ENST00000307522 CFAP221Q4G0U5 840 aa17.72■□□□□ 0.43
CCDC8-201ENST00000307522 CCDC50Q8IVM0 306 aa17.72■□□□□ 0.43
CCDC8-201ENST00000307522 PIGSQ96S52 555 aa17.72■□□□□ 0.43
CCDC8-201ENST00000307522 SNUPNO95149 360 aaKnown RBP17.72■□□□□ 0.43
CCDC8-201ENST00000307522 ADRA2BP18089 450 aa17.72■□□□□ 0.43
CCDC8-201ENST00000307522 USP4Q13107 963 aa17.72■□□□□ 0.43
CCDC8-201ENST00000307522 NBPF20Q3BBV1 942 aa17.72■□□□□ 0.43
CCDC8-201ENST00000307522 ZNF658Q5TYW1 1059 aaPredicted RBP17.72■□□□□ 0.43
CCDC8-201ENST00000307522 CNOT6LQ96LI5 555 aaKnown RBP17.72■□□□□ 0.43
CCDC8-201ENST00000307522 RNF26Q9BY78 433 aaPredicted RBP17.72■□□□□ 0.43
CCDC8-201ENST00000307522 LDHCP07864 332 aa17.72■□□□□ 0.43
CCDC8-201ENST00000307522 TCP1P17987 556 aaKnown RBP17.72■□□□□ 0.43
CCDC8-201ENST00000307522 TTC38Q5R3I4 469 aa17.72■□□□□ 0.43
CCDC8-201ENST00000307522 NLGN1Q8N2Q7 840 aa17.72■□□□□ 0.43
CCDC8-201ENST00000307522 DDX47Q9H0S4 455 aaKnown RBP17.72■□□□□ 0.43
CCDC8-201ENST00000307522 LRRC53A6NM62 1247 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 VIMP08670 466 aaKnown RBP17.71■□□□□ 0.43
CCDC8-201ENST00000307522 STAT6P42226 847 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 ABL2P42684 1182 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 PPP2R2AP63151 447 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 RNASELQ05823 741 aaKnown RBP17.71■□□□□ 0.43
CCDC8-201ENST00000307522 NPY5RQ15761 445 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 LETM2Q2VYF4 491 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 GLE1Q53GS7 698 aaKnown RBP17.71■□□□□ 0.43
CCDC8-201ENST00000307522 CCDC84Q86UT8 332 aaPredicted RBP17.71■□□□□ 0.43
CCDC8-201ENST00000307522 MGARPQ8TDB4 240 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 BORCS6Q96GS4 357 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 PURBQ96QR8 312 aaKnown RBP17.71■□□□□ 0.43
CCDC8-201ENST00000307522 GDF3Q9NR23 364 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 RBM28Q9NW13 759 aaKnown RBP17.71■□□□□ 0.43
CCDC8-201ENST00000307522 ATP6V0A2Q9Y487 856 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 TUBP50607 506 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 RBBP5Q15291 538 aaKnown RBP17.71■□□□□ 0.43
CCDC8-201ENST00000307522 MEA1Q16626 185 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 PAGR1Q9BTK6 254 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 PHF20Q9BVI0 1012 aa17.71■□□□□ 0.43
CCDC8-201ENST00000307522 LINGO3P0C6S8 592 aa17.7■□□□□ 0.42
CCDC8-201ENST00000307522 GSTO1P78417 241 aa17.7■□□□□ 0.42
CCDC8-201ENST00000307522 ZBED6P86452 979 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms