RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TCP1P17987 556 aaKnown RBP6□□□□□ -1.45
VPS50-202ENST00000305866 MCM3P25205 808 aa6□□□□□ -1.45
VPS50-202ENST00000305866 MMP13P45452 471 aa6□□□□□ -1.45
VPS50-202ENST00000305866 MAP9Q49MG5 647 aa6□□□□□ -1.45
VPS50-202ENST00000305866 SLC27A3Q5K4L6 730 aa6□□□□□ -1.45
VPS50-202ENST00000305866 FAM114A1Q8IWE2 563 aa6□□□□□ -1.45
VPS50-202ENST00000305866 LMO3Q8TAP4 145 aa6□□□□□ -1.45
VPS50-202ENST00000305866 SH3RF3Q8TEJ3 882 aaPredicted RBP6□□□□□ -1.45
VPS50-202ENST00000305866 CD101Q93033 1021 aa6□□□□□ -1.45
VPS50-202ENST00000305866 UTP4Q969X6 686 aaKnown RBP6□□□□□ -1.45
VPS50-202ENST00000305866 IFT43Q96FT9 208 aa6□□□□□ -1.45
VPS50-202ENST00000305866 CEP63Q96MT8 703 aa6□□□□□ -1.45
VPS50-202ENST00000305866 TACO1Q9BSH4 297 aaKnown RBP6□□□□□ -1.45
VPS50-202ENST00000305866 AAASQ9NRG9 546 aa6□□□□□ -1.45
VPS50-202ENST00000305866 PFASO15067 1338 aa6□□□□□ -1.45
VPS50-202ENST00000305866 TBX3O15119 743 aa6□□□□□ -1.45
VPS50-202ENST00000305866 KRT86O43790 486 aa6□□□□□ -1.45
VPS50-202ENST00000305866 NUDT17P0C025 328 aa6□□□□□ -1.45
VPS50-202ENST00000305866 OR52Z1P0C646 297 aa6□□□□□ -1.45
VPS50-202ENST00000305866 SLC18A3Q16572 532 aa6□□□□□ -1.45
VPS50-202ENST00000305866 DUPD1Q68J44 220 aa6□□□□□ -1.45
VPS50-202ENST00000305866 BTNL9Q6UXG8 535 aa6□□□□□ -1.45
VPS50-202ENST00000305866 DTHD1Q6ZMT9 781 aa6□□□□□ -1.45
VPS50-202ENST00000305866 RAPGEF5Q92565 580 aa6□□□□□ -1.45
VPS50-202ENST00000305866 ARHGEF1Q92888 912 aaKnown RBP6□□□□□ -1.45
VPS50-202ENST00000305866 CCDC102AQ96A19 550 aa6□□□□□ -1.45
VPS50-202ENST00000305866 LENG9Q96B70 501 aa6□□□□□ -1.45
VPS50-202ENST00000305866 RNF25Q96BH1 459 aaPredicted RBP6□□□□□ -1.45
VPS50-202ENST00000305866 MIEF2Q96C03 454 aa6□□□□□ -1.45
VPS50-202ENST00000305866 TMEM109Q9BVC6 243 aa6□□□□□ -1.45
VPS50-202ENST00000305866 LRRC27Q9C0I9 530 aa6□□□□□ -1.45
VPS50-202ENST00000305866 GLT8D2Q9H1C3 349 aa6□□□□□ -1.45
VPS50-202ENST00000305866 ERVK-5Q9HDB9 667 aa6□□□□□ -1.45
VPS50-202ENST00000305866 RNF14Q9UBS8 474 aa6□□□□□ -1.45
VPS50-202ENST00000305866 AFF2P51816 1311 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 F8VZ95 297 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 KCNQ2O43526 872 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 PALMO75781 387 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 CIITAP33076 1130 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 USP11P51784 963 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 ENPEPQ07075 957 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 RIPK1Q13546 671 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 Q4G0T1 1027 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 AGBL2Q5U5Z8 902 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 HHIPL2Q6UWX4 724 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 NT5DC3Q86UY8 548 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 POTEDQ86YR6 584 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 LNX1Q8TBB1 728 aaPredicted RBP5.99□□□□□ -1.45
VPS50-202ENST00000305866 NUCKS1Q9H1E3 243 aaKnown RBP5.99□□□□□ -1.45
VPS50-202ENST00000305866 ZNHIT6Q9NWK9 470 aaKnown RBP5.99□□□□□ -1.45
VPS50-202ENST00000305866 CEP72Q9P209 647 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 ZSWIM8A7E2V4 1837 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 PLA2G6O60733 806 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 BAG3O95817 575 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 CYP3A4P08684 503 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 ITGA4P13612 1032 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 RXRBP28702 533 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 GNA11P29992 359 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 CDK8P49336 464 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 CASP5P51878 434 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 SLC12A3P55017 1021 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 HADHBP55084 474 aaKnown RBP5.99□□□□□ -1.45
VPS50-202ENST00000305866 ELF3P78545 371 aaPredicted RBP5.99□□□□□ -1.45
VPS50-202ENST00000305866 AKAP17AQ02040 695 aaKnown RBP5.99□□□□□ -1.45
VPS50-202ENST00000305866 MAN2A1Q16706 1144 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 FAM47AQ5JRC9 791 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 TATDN1Q6P1N9 297 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 RHBDF2Q6PJF5 856 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 ZNF804AQ7Z570 1209 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 SPATS2Q86XZ4 545 aaKnown RBP5.99□□□□□ -1.45
VPS50-202ENST00000305866 SP8Q8IXZ3 490 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 SCFD1Q8WVM8 642 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 EEF2KMTQ96G04 330 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 ZNF570Q96NI8 536 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 KDM4CQ9H3R0 1056 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 KLC4Q9NSK0 619 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 MTMR4Q9NYA4 1195 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 ATP6V0A2Q9Y487 856 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 A0A0A6YYK5 440 aaPredicted RBP5.99□□□□□ -1.45
VPS50-202ENST00000305866 MACROD2A1Z1Q3 448 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 SIGLEC16A6NMB1 481 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 PIK3CDO00329 1044 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 PMM2O15305 246 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 SHBGP04278 402 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 NR1D1P20393 614 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 ABL2P42684 1182 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 SCTRP47872 440 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 TFAP4Q01664 338 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 EPHA7Q15375 998 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 EDRF1Q3B7T1 1238 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 ACCSLQ4AC99 568 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 PPP4R3CPQ6ZMV5 832 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 NEK8Q86SG6 692 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 SLF2Q8IX21 1173 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 GMCL1P1Q8NEA9 526 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 OR2W6PQ8NHA6 318 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 RAD54LQ92698 747 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 CALR3Q96L12 384 aaKnown RBP5.99□□□□□ -1.45
VPS50-202ENST00000305866 SETDB2Q96T68 719 aa5.99□□□□□ -1.45
VPS50-202ENST00000305866 IFIH1Q9BYX4 1025 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms