RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CFAP73A6NFT4 308 aa15.96■□□□□ 0.15
SCN3B-201ENST00000299333 PI4K2BG5E9Z4 385 aa15.96■□□□□ 0.15
SCN3B-201ENST00000299333 TRIM66O15016 1216 aa15.96■□□□□ 0.15
SCN3B-201ENST00000299333 PDIK1LQ8N165 341 aa15.96■□□□□ 0.15
SCN3B-201ENST00000299333 SLC26A7Q8TE54 656 aa15.96■□□□□ 0.15
SCN3B-201ENST00000299333 MID2Q9UJV3 735 aa15.96■□□□□ 0.15
SCN3B-201ENST00000299333 CEP55Q53EZ4 464 aa15.96■□□□□ 0.14
SCN3B-201ENST00000299333 FSCBQ5H9T9 825 aa15.96■□□□□ 0.14
SCN3B-201ENST00000299333 TGS1Q96RS0 853 aaKnown RBP15.96■□□□□ 0.14
SCN3B-201ENST00000299333 UBE2TQ9NPD8 197 aaPredicted RBP15.96■□□□□ 0.14
SCN3B-201ENST00000299333 NPATQ14207 1427 aa15.96■□□□□ 0.14
SCN3B-201ENST00000299333 KIF24Q5T7B8 1368 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 TBC1D10BQ4KMP7 808 aaPredicted RBP15.95■□□□□ 0.14
SCN3B-201ENST00000299333 OLFML2BQ68BL8 750 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 STAMBPL1Q96FJ0 436 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 CUEDC2Q9H467 287 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 ANTXR1Q9H6X2 564 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 BABAM1Q9NWV8 329 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 FNDC3AQ9Y2H6 1198 aaKnown RBP15.95■□□□□ 0.14
SCN3B-201ENST00000299333 LRRC14Q15048 493 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 GALNT17Q6IS24 598 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 ANGPTL8Q6UXH0 198 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 GGA1Q9UJY5 639 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 L3MBTL1Q9Y468 752 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 CCDC195A0A1B0GUA6 201 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 LRRIQ4A6NIV6 560 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 PALMO75781 387 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 ZC3H12BQ5HYM0 836 aaKnown RBP15.95■□□□□ 0.14
SCN3B-201ENST00000299333 ARL10Q8N8L6 244 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 NSUN7Q8NE18 718 aaKnown RBP15.95■□□□□ 0.14
SCN3B-201ENST00000299333 EAF2Q96CJ1 260 aaPredicted RBP15.95■□□□□ 0.14
SCN3B-201ENST00000299333 TEKT3Q9BXF9 490 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 FOXP1Q9H334 677 aaPredicted RBP15.95■□□□□ 0.14
SCN3B-201ENST00000299333 CYP4F11Q9HBI6 524 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 TMEM232C9JQI7 657 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 CADPS2Q86UW7 1296 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 THAP9Q9H5L6 903 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 MED23Q9ULK4 1368 aa15.95■□□□□ 0.14
SCN3B-201ENST00000299333 M0QZ92 97 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 CEBPAP49715 358 aaPredicted RBP15.94■□□□□ 0.14
SCN3B-201ENST00000299333 FKBP3Q00688 224 aaKnown RBP15.94■□□□□ 0.14
SCN3B-201ENST00000299333 DNAJC24Q6P3W2 148 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 CATSPER3Q86XQ3 398 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 SUGCTQ9HAC7 445 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 CTIFO43310 598 aaKnown RBP15.94■□□□□ 0.14
SCN3B-201ENST00000299333 NBNO60934 754 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 TTLL7Q6ZT98 887 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 LRRC47Q8N1G4 583 aaKnown RBP15.94■□□□□ 0.14
SCN3B-201ENST00000299333 TMCO5AQ8N6Q1 288 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 IL17RAQ96F46 866 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 BTBD6Q96KE9 485 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 ASCC2Q9H1I8 757 aaPredicted RBP15.94■□□□□ 0.14
SCN3B-201ENST00000299333 PCIF1Q9H4Z3 704 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 ABCF3Q9NUQ8 709 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 ATP10BO94823 1461 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 MROH5Q6ZUA9 1318 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 DNMT1P26358 1616 aaKnown RBP15.94■□□□□ 0.14
SCN3B-201ENST00000299333 FAM135BQ49AJ0 1406 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 APOA1P02647 267 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 HOXC9P31274 260 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 ELF1P32519 619 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 CYTH1Q15438 398 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 DDB1Q16531 1140 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 ARHGEF16Q5VV41 709 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 EHD2Q9NZN4 543 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 ADAMTS1Q9UHI8 967 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 ESYT3A0FGR9 886 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 CCDC188H7C350 402 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 HNRNPDLO14979 420 aaKnown RBP15.94■□□□□ 0.14
SCN3B-201ENST00000299333 KRT37O76014 449 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 CHEK2O96017 543 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 PLA2G4DQ86XP0 818 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 MB21D1Q8N884 522 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 SUPT20HQ8NEM7 779 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 RASGRP4Q8TDF6 673 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.94■□□□□ 0.14
SCN3B-201ENST00000299333 MRPL47Q9HD33 250 aaKnown RBP15.94■□□□□ 0.14
SCN3B-201ENST00000299333 RCOR1Q9UKL0 485 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 A0A1W2PP64 1363 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 A2MP01023 1474 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 H0YCG3 227 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 ERFP50548 548 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 CABLES1Q8TDN4 633 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 PARP3Q9Y6F1 533 aa15.94■□□□□ 0.14
SCN3B-201ENST00000299333 PODXLO00592 558 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 DMPKQ09013 629 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 FAM149B1Q96BN6 582 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 THAP11Q96EK4 314 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 ADA2Q9NZK5 511 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 SUN2Q9UH99 717 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 CFAP69A5D8W1 941 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 DIAPH2O60879 1101 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 DDAH1O94760 285 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 CARSP49589 748 aaKnown RBP15.93■□□□□ 0.14
SCN3B-201ENST00000299333 MAST3O60307 1309 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 ABCC12Q96J65 1359 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 USP27XA6NNY8 438 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 CDC25AP30304 524 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 ARFIP2P53365 341 aa15.93■□□□□ 0.14
SCN3B-201ENST00000299333 PMS2P54278 862 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms