RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ZC3H4Q9UPT8 1303 aaKnown RBP27.6■■■□□ 2.01
ROM1-201ENST00000278833 CETN3O15182 167 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 ZNF185O15231 689 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 HSP90B2PQ58FF3 399 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 SMCR8Q8TEV9 937 aaPredicted RBP27.59■■■□□ 2.01
ROM1-201ENST00000278833 P2RX7Q99572 595 aaKnown RBP27.59■■■□□ 2.01
ROM1-201ENST00000278833 POLR3CQ9BUI4 534 aaPredicted RBP27.59■■■□□ 2.01
ROM1-201ENST00000278833 LTBP3Q9NS15 1303 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 BTNL10A8MVZ5 291 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 F5H6K3 240 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 SSBP05455 408 aaKnown RBP eCLIP27.59■■■□□ 2.01
ROM1-201ENST00000278833 ANXA13P27216 316 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 KLRC3Q07444 240 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 TRAF1Q13077 416 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 GIT2Q14161 759 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 CATSPER3Q86XQ3 398 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 ZNF277Q9NRM2 450 aaPredicted RBP27.59■■■□□ 2.01
ROM1-201ENST00000278833 HPCAL4Q9UM19 191 aa27.59■■■□□ 2.01
ROM1-201ENST00000278833 SPATA31C1P0DKV0 1188 aa27.58■■■□□ 2.01
ROM1-201ENST00000278833 TRIM34Q9BYJ4 488 aa27.58■■■□□ 2.01
ROM1-201ENST00000278833 RBBP6Q7Z6E9 1792 aaKnown RBP27.58■■■□□ 2.01
ROM1-201ENST00000278833 MYH10P35580 1976 aa27.58■■■□□ 2.01
ROM1-201ENST00000278833 PDXKO00764 312 aa27.57■■■□□ 2
ROM1-201ENST00000278833 NDUFB10O96000 172 aa27.57■■■□□ 2
ROM1-201ENST00000278833 SLC18A3Q16572 532 aa27.57■■■□□ 2
ROM1-201ENST00000278833 ABCB5Q2M3G0 1257 aa27.57■■■□□ 2
ROM1-201ENST00000278833 AENQ8WTP8 325 aaKnown RBP27.57■■■□□ 2
ROM1-201ENST00000278833 FBXL5Q9UKA1 691 aa27.57■■■□□ 2
ROM1-201ENST00000278833 VAV3Q9UKW4 847 aa27.57■■■□□ 2
ROM1-201ENST00000278833 DNM3Q9UQ16 869 aa27.57■■■□□ 2
ROM1-201ENST00000278833 POTEFA5A3E0 1075 aa27.57■■■□□ 2
ROM1-201ENST00000278833 CLSTN1O94985 981 aa27.57■■■□□ 2
ROM1-201ENST00000278833 POTEIP0CG38 1075 aa27.57■■■□□ 2
ROM1-201ENST00000278833 C10orf76Q5T2E6 689 aa27.57■■■□□ 2
ROM1-201ENST00000278833 POTEGQ6S5H5 508 aa27.57■■■□□ 2
ROM1-201ENST00000278833 POTEEQ6S8J3 1075 aa27.57■■■□□ 2
ROM1-201ENST00000278833 SPATA4Q8NEY3 305 aa27.57■■■□□ 2
ROM1-201ENST00000278833 DBNDD1Q9H9R9 158 aa27.57■■■□□ 2
ROM1-201ENST00000278833 SBF1O95248 1867 aa27.56■■■□□ 2
ROM1-201ENST00000278833 ERICH4A6NGS2 130 aa27.56■■■□□ 2
ROM1-201ENST00000278833 SPDYE3A6NKU9 549 aa27.56■■■□□ 2
ROM1-201ENST00000278833 SLC16A3O15427 465 aaKnown RBP27.56■■■□□ 2
ROM1-201ENST00000278833 RPS6KA5O75582 802 aa27.56■■■□□ 2
ROM1-201ENST00000278833 STAT3P40763 770 aa27.56■■■□□ 2
ROM1-201ENST00000278833 GFPT1Q06210 699 aaPredicted RBP27.56■■■□□ 2
ROM1-201ENST00000278833 ADAM9Q13443 819 aa27.56■■■□□ 2
ROM1-201ENST00000278833 GLE1Q53GS7 698 aaKnown RBP27.56■■■□□ 2
ROM1-201ENST00000278833 KLHDC7AQ5VTJ3 777 aa27.56■■■□□ 2
ROM1-201ENST00000278833 DPY19L2P1Q6NXN4 242 aa27.56■■■□□ 2
ROM1-201ENST00000278833 TLR10Q9BXR5 811 aa27.56■■■□□ 2
ROM1-201ENST00000278833 VPS18Q9P253 973 aa27.56■■■□□ 2
ROM1-201ENST00000278833 PCDHGC5Q9Y5F6 944 aa27.56■■■□□ 2
ROM1-201ENST00000278833 ECE2O60344 883 aa27.55■■■□□ 2
ROM1-201ENST00000278833 KRT18P05783 430 aaKnown RBP27.55■■■□□ 2
ROM1-201ENST00000278833 C2orf54Q08AI8 447 aa27.55■■■□□ 2
ROM1-201ENST00000278833 NAB2Q15742 525 aa27.55■■■□□ 2
ROM1-201ENST00000278833 NFIL3Q16649 462 aa27.55■■■□□ 2
ROM1-201ENST00000278833 KNOP1Q1ED39 458 aaKnown RBP27.55■■■□□ 2
ROM1-201ENST00000278833 PRR16Q569H4 304 aa27.55■■■□□ 2
ROM1-201ENST00000278833 TDRD12Q587J7 1177 aaKnown RBP27.55■■■□□ 2
ROM1-201ENST00000278833 KIAA0825Q8IV33 1275 aa27.55■■■□□ 2
ROM1-201ENST00000278833 NELFCDQ8IXH7 590 aa27.55■■■□□ 2
ROM1-201ENST00000278833 SALL4Q9UJQ4 1053 aa27.55■■■□□ 2
ROM1-201ENST00000278833 NPHP3-ACAD11A0A0J9YXS1 232 aa27.55■■■□□ 2
ROM1-201ENST00000278833 CALUO43852 315 aaPredicted RBP27.55■■■□□ 2
ROM1-201ENST00000278833 BMP3P12645 472 aa27.55■■■□□ 2
ROM1-201ENST00000278833 POLR2FP61218 127 aaKnown RBP27.55■■■□□ 2
ROM1-201ENST00000278833 FAN1Q9Y2M0 1017 aa27.55■■■□□ 2
ROM1-201ENST00000278833 LOXHD1Q8IVV2 1947 aa27.54■■■□□ 2
ROM1-201ENST00000278833 LMNB1P20700 586 aa27.54■■■□□ 2
ROM1-201ENST00000278833 NR2F2P24468 414 aa27.54■■■□□ 2
ROM1-201ENST00000278833 METTL14Q9HCE5 456 aaKnown RBP27.54■■■□□ 2
ROM1-201ENST00000278833 NLRC4Q9NPP4 1024 aa27.54■■■□□ 2
ROM1-201ENST00000278833 TBC1D7Q9P0N9 293 aa27.54■■■□□ 2
ROM1-201ENST00000278833 BZW2Q9Y6E2 419 aaKnown RBP27.54■■■□□ 2
ROM1-201ENST00000278833 GRID2IPA4D2P6 1211 aa27.53■■■□□ 2
ROM1-201ENST00000278833 FAM86B1E9PN63 330 aa27.53■■■□□ 2
ROM1-201ENST00000278833 OPLAHO14841 1288 aa27.53■■■□□ 2
ROM1-201ENST00000278833 N4BP1O75113 896 aaKnown RBP27.53■■■□□ 2
ROM1-201ENST00000278833 PRPF6O94906 941 aaKnown RBP27.53■■■□□ 2
ROM1-201ENST00000278833 EYA4O95677 639 aa27.53■■■□□ 2
ROM1-201ENST00000278833 FAM86B2P0C5J1 330 aa27.53■■■□□ 2
ROM1-201ENST00000278833 SLURP2P0DP57 97 aa27.53■■■□□ 2
ROM1-201ENST00000278833 MUTP22033 750 aa27.53■■■□□ 2
ROM1-201ENST00000278833 TCP10Q12799 353 aa27.53■■■□□ 2
ROM1-201ENST00000278833 KCNH2Q12809 1159 aa27.53■■■□□ 2
ROM1-201ENST00000278833 SHROOM1Q2M3G4 852 aaPredicted RBP27.53■■■□□ 2
ROM1-201ENST00000278833 SUPT20HQ8NEM7 779 aa27.53■■■□□ 2
ROM1-201ENST00000278833 GOLGA5Q8TBA6 731 aa27.53■■■□□ 2
ROM1-201ENST00000278833 REEP2Q9BRK0 252 aa27.53■■■□□ 2
ROM1-201ENST00000278833 OLFML3Q9NRN5 406 aa27.53■■■□□ 2
ROM1-201ENST00000278833 TYW1Q9NV66 732 aaKnown RBP27.53■■■□□ 2
ROM1-201ENST00000278833 FAM196BA6NMK8 535 aa27.53■■■□□ 2
ROM1-201ENST00000278833 CES2O00748 559 aa27.53■■■□□ 2
ROM1-201ENST00000278833 MSH4O15457 936 aa27.53■■■□□ 2
ROM1-201ENST00000278833 GAP43P17677 238 aa27.53■■■□□ 2
ROM1-201ENST00000278833 PAFAH1B1P43034 410 aa27.53■■■□□ 2
ROM1-201ENST00000278833 ASIC2Q16515 512 aa27.53■■■□□ 2
ROM1-201ENST00000278833 SELENOOQ9BVL4 669 aa27.53■■■□□ 2
ROM1-201ENST00000278833 HDAC9Q9UKV0 1011 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms