RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ZNF507Q8TCN5 953 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 PITPNM3Q9BZ71 974 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 GDAQ9Y2T3 454 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 DNMBPQ6XZF7 1577 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 CAPRIN1Q14444 709 aaKnown RBP18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 MAN2A1Q16706 1144 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 SSH3Q8TE77 659 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 PFDN6O15212 129 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 DDAH1O94760 285 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 RAP1GDS1P52306 607 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 TMPRSS15P98073 1019 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 MKRN4PQ13434 485 aaPredicted RBP18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 PPP6R3Q5H9R7 873 aaPredicted RBP18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 ANGPTL2Q9UKU9 493 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 EPHB1P54762 984 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 TTC30AQ86WT1 665 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 HSPA4LO95757 839 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 APBA1Q02410 837 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 PIGOQ8TEQ8 1089 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 HOOK2Q96ED9 719 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 C19orf44Q9H6X5 657 aa18.09■□□□□ 0.49
TSPAN3-201ENST00000267970 NEK9Q8TD19 979 aa18.08■□□□□ 0.49
TSPAN3-201ENST00000267970 DBNDD1Q9H9R9 158 aa18.08■□□□□ 0.49
TSPAN3-201ENST00000267970 PPP6R2O75170 966 aa18.08■□□□□ 0.49
TSPAN3-201ENST00000267970 WBP4O75554 376 aaKnown RBP18.08■□□□□ 0.49
TSPAN3-201ENST00000267970 SKIP12755 728 aa18.08■□□□□ 0.49
TSPAN3-201ENST00000267970 ARHGDIAP52565 204 aa18.08■□□□□ 0.49
TSPAN3-201ENST00000267970 KIF23Q02241 960 aaPredicted RBP18.08■□□□□ 0.49
TSPAN3-201ENST00000267970 CPVLQ9H3G5 476 aa18.08■□□□□ 0.49
TSPAN3-201ENST00000267970 STRIP2Q9ULQ0 834 aa18.08■□□□□ 0.49
TSPAN3-201ENST00000267970 GYG2O15488 501 aa18.08■□□□□ 0.48
TSPAN3-201ENST00000267970 VSTM4Q8IW00 320 aa18.08■□□□□ 0.48
TSPAN3-201ENST00000267970 SRGAP2BP0DMP2 458 aa18.08■□□□□ 0.48
TSPAN3-201ENST00000267970 UBE3AQ05086 875 aa18.08■□□□□ 0.48
TSPAN3-201ENST00000267970 SUGT1Q9Y2Z0 365 aa18.08■□□□□ 0.48
TSPAN3-201ENST00000267970 ABCC4O15439 1325 aa18.08■□□□□ 0.48
TSPAN3-201ENST00000267970 SEC24DO94855 1032 aaPredicted RBP18.08■□□□□ 0.48
TSPAN3-201ENST00000267970 ATXN7L3BQ96GX2 97 aa18.08■□□□□ 0.48
TSPAN3-201ENST00000267970 ACCSQ96QU6 501 aa18.08■□□□□ 0.48
TSPAN3-201ENST00000267970 EMILIN3Q9NT22 766 aa18.08■□□□□ 0.48
TSPAN3-201ENST00000267970 ATG16L1Q676U5 607 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 NUDCD1Q96RS6 583 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 GTSE1Q9NYZ3 720 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 PRPSAP2O60256 369 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 SYT2Q8N9I0 419 aaPredicted RBP18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 NRBP2Q9NSY0 501 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 ZBTB24O43167 697 aaPredicted RBP18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 ZRANB2O95218 330 aaKnown RBP eCLIP18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 SLFN14P0C7P3 912 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 ATXN3P54252 364 aaPredicted RBP18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 MAGOHP61326 146 aaKnown RBP18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 LINC00301Q8NCQ3 95 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 MAPK13O15264 365 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 SUPT3HO75486 399 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 HLA-DPA1P20036 260 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 LMNB2Q03252 620 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 ENOX1Q8TC92 643 aaKnown RBP18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 GSDMAQ96QA5 445 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 CENPKQ9BS16 269 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 FAM8A1Q9UBU6 413 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 HEY1Q9Y5J3 304 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 SERPING1P05155 500 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 MCF2P10911 925 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 PMLP29590 882 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 SRRM1Q8IYB3 904 aaKnown RBP18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 PDCD6IPQ8WUM4 868 aaKnown RBP18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 ARL8AQ96BM9 186 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 DRC3Q9H069 523 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 SPC25Q9HBM1 224 aa18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 SARS2Q9NP81 518 aaKnown RBP18.07■□□□□ 0.48
TSPAN3-201ENST00000267970 ARL4AP40617 200 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 CATSPER3Q86XQ3 398 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 RNF135Q8IUD6 432 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 PCYT1AP49585 367 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 HPS4Q9NQG7 708 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 MYO1CO00159 1063 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 C1orf146Q5VVC0 180 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 ST13P4Q8IZP2 240 aaPredicted RBP18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 MAP4K1Q92918 833 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 SLC13A1Q9BZW2 595 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 MOSPD1Q9UJG1 213 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 GTPBP10A4D1E9 387 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 E2F6O75461 281 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 PLEKHA8P1O95397 391 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 MMP1P03956 469 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 PSMC1P62191 440 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 RNASELQ05823 741 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 ZBTB38Q8NAP3 1195 aaPredicted RBP18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 TTC1Q99614 292 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 MB21D1Q8N884 522 aa18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 DHTKD1Q96HY7 919 aaPredicted RBP18.06■□□□□ 0.48
TSPAN3-201ENST00000267970 EIF3CLB5ME19 914 aaKnown RBP18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 PLA2G4BP0C869 781 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 USPL1Q5W0Q7 1092 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 NLRP4Q96MN2 994 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 EIF3CQ99613 913 aaKnown RBP18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 EFHD1Q9BUP0 239 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 AS3MTQ9HBK9 375 aa18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 CPSF3Q9UKF6 684 aaKnown RBP18.05■□□□□ 0.48
TSPAN3-201ENST00000267970 WDR64B1ANS9 1081 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms