RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 SH2D4AQ9H788 454 aa18.01■□□□□ 0.47
SCAP-201ENST00000265565 DNAJC12Q9UKB3 198 aa18.01■□□□□ 0.47
SCAP-201ENST00000265565 PNMA6FA0A0J9YX94 578 aa18.01■□□□□ 0.47
SCAP-201ENST00000265565 EIF3BP55884 814 aaKnown RBP18.01■□□□□ 0.47
SCAP-201ENST00000265565 PROM2Q8N271 834 aa18.01■□□□□ 0.47
SCAP-201ENST00000265565 DMGDHQ9UI17 866 aaKnown RBP18.01■□□□□ 0.47
SCAP-201ENST00000265565 TESPA1A2RU30 521 aaPredicted RBP18■□□□□ 0.47
SCAP-201ENST00000265565 CFAP157Q5JU67 520 aa18■□□□□ 0.47
SCAP-201ENST00000265565 LRRC31Q6UY01 552 aa18■□□□□ 0.47
SCAP-201ENST00000265565 PALM2Q8IXS6 379 aa18■□□□□ 0.47
SCAP-201ENST00000265565 MSANTD4Q8NCY6 345 aa18■□□□□ 0.47
SCAP-201ENST00000265565 GRK7Q8WTQ7 553 aa18■□□□□ 0.47
SCAP-201ENST00000265565 RILPQ96NA2 401 aa18■□□□□ 0.47
SCAP-201ENST00000265565 PSMD1Q99460 953 aa18■□□□□ 0.47
SCAP-201ENST00000265565 ANO3Q9BYT9 981 aa18■□□□□ 0.47
SCAP-201ENST00000265565 TYW1Q9NV66 732 aaKnown RBP18■□□□□ 0.47
SCAP-201ENST00000265565 LRRC8CQ8TDW0 803 aa18■□□□□ 0.47
SCAP-201ENST00000265565 GOLPH3Q9H4A6 298 aa18■□□□□ 0.47
SCAP-201ENST00000265565 C1orf112Q9NSG2 853 aa18■□□□□ 0.47
SCAP-201ENST00000265565 CPSF2Q9P2I0 782 aaKnown RBP18■□□□□ 0.47
SCAP-201ENST00000265565 MEFVO15553 781 aaPredicted RBP18■□□□□ 0.47
SCAP-201ENST00000265565 ORC4O43929 436 aa18■□□□□ 0.47
SCAP-201ENST00000265565 ALAS1P13196 640 aa18■□□□□ 0.47
SCAP-201ENST00000265565 MAPK4P31152 587 aa18■□□□□ 0.47
SCAP-201ENST00000265565 PPP2R2AP63151 447 aa18■□□□□ 0.47
SCAP-201ENST00000265565 HDLBPQ00341 1268 aaKnown RBP18■□□□□ 0.47
SCAP-201ENST00000265565 CCDC93Q567U6 631 aa18■□□□□ 0.47
SCAP-201ENST00000265565 GIMAP8Q8ND71 665 aaPredicted RBP18■□□□□ 0.47
SCAP-201ENST00000265565 CHURC1Q8WUH1 139 aa18■□□□□ 0.47
SCAP-201ENST00000265565 CCT8L2Q96SF2 557 aa18■□□□□ 0.47
SCAP-201ENST00000265565 POTEFA5A3E0 1075 aa18■□□□□ 0.47
SCAP-201ENST00000265565 SART1O43290 800 aaKnown RBP18■□□□□ 0.47
SCAP-201ENST00000265565 POTEIP0CG38 1075 aa18■□□□□ 0.47
SCAP-201ENST00000265565 NSFP46459 744 aaKnown RBP18■□□□□ 0.47
SCAP-201ENST00000265565 TROAPQ12815 778 aa18■□□□□ 0.47
SCAP-201ENST00000265565 POTEGQ6S5H5 508 aa18■□□□□ 0.47
SCAP-201ENST00000265565 POTEEQ6S8J3 1075 aa18■□□□□ 0.47
SCAP-201ENST00000265565 ZIM3Q96PE6 472 aa18■□□□□ 0.47
SCAP-201ENST00000265565 RAB3IPQ96QF0 476 aaPredicted RBP18■□□□□ 0.47
SCAP-201ENST00000265565 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 DDX42Q86XP3 938 aaKnown RBP eCLIP17.99■□□□□ 0.47
SCAP-201ENST00000265565 SREK1Q8WXA9 508 aaKnown RBP17.99■□□□□ 0.47
SCAP-201ENST00000265565 IL17RAQ96F46 866 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 IWS1Q96ST2 819 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 IL9RQ01113 521 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 GLYCTKQ8IVS8 523 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 TTC16Q8NEE8 873 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 PARVGQ9HBI0 331 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 POMGNT1Q8WZA1 660 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 CCDC17Q96LX7 622 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 TEKT3Q9BXF9 490 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 ANAPC5Q9UJX4 755 aa17.99■□□□□ 0.47
SCAP-201ENST00000265565 A0A0U1RQJ8 604 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 TXNDC9O14530 226 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 STAT3P40763 770 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 TMED2Q15363 201 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 ABCB5Q2M3G0 1257 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 P3H4Q92791 437 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 NSUN4Q96CB9 384 aaKnown RBP17.98■□□□□ 0.47
SCAP-201ENST00000265565 VWDEQ8N2E2 1590 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 DIP2CQ9Y2E4 1556 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 MYMKA6NI61 221 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 NR3C1P04150 777 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 HMGB2P26583 209 aaKnown RBP17.98■□□□□ 0.47
SCAP-201ENST00000265565 EZH2Q15910 746 aaKnown RBP17.98■□□□□ 0.47
SCAP-201ENST00000265565 HVCN1Q96D96 273 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 HOOK2Q96ED9 719 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 NT5C1BQ96P26 610 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 RAB20Q9NX57 234 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 NOC2LQ9Y3T9 749 aaKnown RBP17.98■□□□□ 0.47
SCAP-201ENST00000265565 SALL1Q9NSC2 1324 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.98■□□□□ 0.47
SCAP-201ENST00000265565 hCG_1984214I3L0E3 225 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 ZRANB2O95218 330 aaKnown RBP eCLIP17.98■□□□□ 0.473e-10■■□□□ 14.4
SCAP-201ENST00000265565 GAP43P17677 238 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 TTLL12Q14166 644 aaPredicted RBP17.98■□□□□ 0.47
SCAP-201ENST00000265565 C6orf118Q5T5N4 469 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 BRINP3Q76B58 766 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 ZNF713Q8N859 430 aaPredicted RBP17.98■□□□□ 0.47
SCAP-201ENST00000265565 VCXQ9H320 206 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 KRT19P08727 400 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 CORO7P57737 925 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 SLMAPQ14BN4 828 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 ZNF746Q6NUN9 644 aaPredicted RBP17.98■□□□□ 0.47
SCAP-201ENST00000265565 TRAPPC11Q7Z392 1133 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 ELOA2Q8IYF1 753 aaPredicted RBP17.98■□□□□ 0.47
SCAP-201ENST00000265565 CCDC110Q8TBZ0 833 aa17.98■□□□□ 0.47
SCAP-201ENST00000265565 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.98■□□□□ 0.472e-8■■□□□ 13.4
SCAP-201ENST00000265565 USP32Q8NFA0 1604 aa17.97■□□□□ 0.47
SCAP-201ENST00000265565 GOLGA8IPA6NC78 632 aa17.97■□□□□ 0.47
SCAP-201ENST00000265565 GOLGA8JA6NMD2 632 aa17.97■□□□□ 0.47
SCAP-201ENST00000265565 FAM196BA6NMK8 535 aa17.97■□□□□ 0.47
SCAP-201ENST00000265565 BFSP1Q12934 665 aa17.97■□□□□ 0.47
SCAP-201ENST00000265565 PPP4R3CPQ6ZMV5 832 aa17.97■□□□□ 0.47
SCAP-201ENST00000265565 FAM47EQ6ZV65 393 aa17.97■□□□□ 0.47
SCAP-201ENST00000265565 RSAD2Q8WXG1 361 aa17.97■□□□□ 0.47
SCAP-201ENST00000265565 ZNF577Q9BSK1 485 aa17.97■□□□□ 0.47
SCAP-201ENST00000265565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.97■□□□□ 0.47
SCAP-201ENST00000265565 CAPN6Q9Y6Q1 641 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms