RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 AK8Q96MA6 479 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 KBTBD4Q9NVX7 518 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 PLAGL2Q9UPG8 496 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 STXBP3O00186 592 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 ASAP2O43150 1006 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 KLRC4O43908 158 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 CTNND1O60716 968 aaKnown RBP14.34□□□□□ -0.11
NUP54-201ENST00000264883 GNAT1P11488 350 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 ADRA2BP18089 450 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 ROR2Q01974 943 aaKnown RBP14.34□□□□□ -0.11
NUP54-201ENST00000264883 GNPTABQ3T906 1256 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 SLC10A5Q5PT55 438 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 ZSCAN29Q8IWY8 852 aaPredicted RBP14.34□□□□□ -0.11
NUP54-201ENST00000264883 KLHL7Q8IXQ5 586 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 DAGLBQ8NCG7 672 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 CENPTQ96BT3 561 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 PSMD1Q99460 953 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 TMX4Q9H1E5 349 aaPredicted RBP14.34□□□□□ -0.11
NUP54-201ENST00000264883 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.34□□□□□ -0.11
NUP54-201ENST00000264883 LAMB1P07942 1786 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 ABCB11O95342 1321 aa14.34□□□□□ -0.11
NUP54-201ENST00000264883 SMIM24O75264 130 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 MYBP10242 640 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 HMGB2P26583 209 aaKnown RBP14.33□□□□□ -0.11
NUP54-201ENST00000264883 ECHS1P30084 290 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 ALDH5A1P51649 535 aaPredicted RBP14.33□□□□□ -0.11
NUP54-201ENST00000264883 ERVK-9P63128 1117 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 KCNJ2P63252 427 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 CUL1Q13616 776 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 IFI16Q16666 785 aaKnown RBP14.33□□□□□ -0.11
NUP54-201ENST00000264883 ERFEQ4G0M1 354 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 ANKRD20A2Q5SQ80 823 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 ANKRD20A1Q5TYW2 823 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 ANKRD20A3Q5VUR7 823 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 TRPM8Q7Z2W7 1104 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 CACNA2D4Q7Z3S7 1137 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 PROM2Q8N271 834 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 CSGALNACT2Q8N6G5 542 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 MDM1Q8TC05 714 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 P2RX5Q93086 422 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 PCDHA4Q9UN74 947 aa14.33□□□□□ -0.11
NUP54-201ENST00000264883 UBA7P41226 1012 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 RNASE9P60153 205 aaKnown RBP14.33□□□□□ -0.12
NUP54-201ENST00000264883 RASSF7Q02833 373 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 SF3A3Q12874 501 aaKnown RBP eCLIP14.33□□□□□ -0.12
NUP54-201ENST00000264883 MTMR3Q13615 1198 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 CACNA1SQ13698 1873 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 TRAPPC3LQ5T215 181 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 ARHGAP27Q6ZUM4 889 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 PIGWQ7Z7B1 504 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 ERICH1Q86X53 443 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 SPICE1Q8N0Z3 855 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 RNF10Q8N5U6 811 aaKnown RBP14.33□□□□□ -0.12
NUP54-201ENST00000264883 TEX9Q8N6V9 391 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 PRCCQ92733 491 aaPredicted RBP14.33□□□□□ -0.12
NUP54-201ENST00000264883 AGAP1Q9UPQ3 857 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 COL4A1P02462 1669 aa14.33□□□□□ -0.12
NUP54-201ENST00000264883 GOLGA6L10A0A0M3HER8 536 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 hCG_1642624A0A1W2PR95 340 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 TTC36A6NLP5 189 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 EVI5O60447 810 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 MTIF2P46199 727 aaKnown RBP14.32□□□□□ -0.12
NUP54-201ENST00000264883 GCLCP48506 637 aaPredicted RBP14.32□□□□□ -0.12
NUP54-201ENST00000264883 GNAQP50148 359 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 LAMB3Q13751 1172 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 SF3B3Q15393 1217 aaKnown RBP14.32□□□□□ -0.12
NUP54-201ENST00000264883 TAF11Q15544 211 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 KRT71Q3SY84 523 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 ZNF317Q96PQ6 595 aaPredicted RBP14.32□□□□□ -0.12
NUP54-201ENST00000264883 MOV10L1Q9BXT6 1211 aaKnown RBP14.32□□□□□ -0.12
NUP54-201ENST00000264883 SAMD15Q9P1V8 674 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 FBXL5Q9UKA1 691 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 TNS1Q9HBL0 1735 aaKnown RBP14.32□□□□□ -0.12
NUP54-201ENST00000264883 ATP2A2P16615 1042 aaKnown RBP14.32□□□□□ -0.12
NUP54-201ENST00000264883 NAALADL2Q58DX5 795 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 CCDC178Q5BJE1 867 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 ARMC3Q5W041 872 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 C3orf67Q6ZVT6 689 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 SETDB2Q96T68 719 aa14.32□□□□□ -0.12
NUP54-201ENST00000264883 NOC4LQ9BVI4 516 aaKnown RBP14.32□□□□□ -0.12
NUP54-201ENST00000264883 A0A1B0GUL6 1792 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 RGPD3A6NKT7 1758 aaPredicted RBP14.31□□□□□ -0.12
NUP54-201ENST00000264883 RGPD4Q7Z3J3 1758 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 CCDC194A0A1B0GVG4 234 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 DPPA5A6NC42 116 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 EIF4E1BA6NMX2 242 aaKnown RBP14.31□□□□□ -0.12
NUP54-201ENST00000264883 FGFR1OPO95684 399 aaKnown RBP14.31□□□□□ -0.12
NUP54-201ENST00000264883 AMPD3Q01432 767 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 SEPT2Q15019 361 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 BICDL1Q6ZP65 573 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 ADGRA1Q86SQ6 560 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 EEF2KMTQ96G04 330 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 NAF1Q96HR8 494 aaKnown RBP14.31□□□□□ -0.12
NUP54-201ENST00000264883 CNOT6LQ96LI5 555 aaKnown RBP14.31□□□□□ -0.12
NUP54-201ENST00000264883 DUSP9Q99956 384 aaKnown RBP14.31□□□□□ -0.12
NUP54-201ENST00000264883 NYXQ9GZU5 481 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 UPP2O95045 317 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 RFC4P35249 363 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 CCNG1P51959 295 aa14.31□□□□□ -0.12
NUP54-201ENST00000264883 NCALDP61601 193 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms