RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 BLOC1S4Q9NUP1 217 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 ETAA1Q9NY74 926 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 C15orf41Q9Y2V0 281 aa16.36■□□□□ 0.21
XRCC1-201ENST00000262887 NOC2LQ9Y3T9 749 aaKnown RBP16.36■□□□□ 0.21
XRCC1-201ENST00000262887 F8VZ95 297 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 DHX9Q08211 1270 aaKnown RBP16.35■□□□□ 0.21
XRCC1-201ENST00000262887 KRT25Q7Z3Z0 450 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 GLIS3Q8NEA6 775 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 TLCD1Q96CP7 247 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 CRNKL1Q9BZJ0 848 aaKnown RBP16.35■□□□□ 0.21
XRCC1-201ENST00000262887 AMACRQ9UHK6 382 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 KRIT1O00522 736 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
XRCC1-201ENST00000262887 CYTH3O43739 400 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 ANP32DO95626 131 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 GCKP35557 465 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 TXKP42681 527 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 GRB10Q13322 594 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 ITIH4Q14624 930 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 GRM4Q14833 912 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 ASIC2Q16515 512 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 NEK8Q86SG6 692 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 PROM2Q8N271 834 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 ITFG2Q969R8 447 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 STK17AQ9UEE5 414 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 TOGARAM1Q9Y4F4 1720 aa16.35■□□□□ 0.21
XRCC1-201ENST00000262887 CFAP73A6NFT4 308 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 CCDC188H7C350 402 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 TRAF5O00463 557 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 ASAP2O43150 1006 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 NUP98P52948 1817 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 FKBP3Q00688 224 aaKnown RBP16.34■□□□□ 0.21
XRCC1-201ENST00000262887 TFAP4Q01664 338 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 NHSL1Q5SYE7 1610 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 BRINP3Q76B58 766 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 TBC1D1Q86TI0 1168 aaPredicted RBP16.34■□□□□ 0.21
XRCC1-201ENST00000262887 ZNF317Q96PQ6 595 aaPredicted RBP16.34■□□□□ 0.21
XRCC1-201ENST00000262887 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■□□□□ 10.9
XRCC1-201ENST00000262887 SPATS2LQ9NUQ6 558 aaKnown RBP16.34■□□□□ 0.21
XRCC1-201ENST00000262887 ARPP21Q9UBL0 812 aaPredicted RBP16.34■□□□□ 0.21
XRCC1-201ENST00000262887 SLIT2O94813 1529 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 NAPAP54920 295 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 EIF3BP55884 814 aaKnown RBP16.34■□□□□ 0.21
XRCC1-201ENST00000262887 ICA1Q05084 483 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 SLC35G1Q2M3R5 365 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 DGKHQ86XP1 1220 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 SPDL1Q96EA4 605 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 LRRC4CQ9HCJ2 640 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 PNMA2Q9UL42 364 aa16.34■□□□□ 0.21
XRCC1-201ENST00000262887 BTNL10A8MVZ5 291 aa16.33■□□□□ 0.21
XRCC1-201ENST00000262887 IFI16Q16666 785 aaKnown RBP16.33■□□□□ 0.21
XRCC1-201ENST00000262887 CCDC26Q8TAB7 109 aa16.33■□□□□ 0.21
XRCC1-201ENST00000262887 SPAG5Q96R06 1193 aa16.33■□□□□ 0.21
XRCC1-201ENST00000262887 TRPC6Q9Y210 931 aa16.33■□□□□ 0.21
XRCC1-201ENST00000262887 L3MBTL1Q9Y468 752 aa16.33■□□□□ 0.21
XRCC1-201ENST00000262887 A0A1B0GUL6 1792 aa16.33■□□□□ 0.21
XRCC1-201ENST00000262887 MMEP08473 750 aa16.33■□□□□ 0.2
XRCC1-201ENST00000262887 CHN1P15882 459 aa16.33■□□□□ 0.2
XRCC1-201ENST00000262887 BZW1Q7L1Q6 419 aaKnown RBP16.33■□□□□ 0.2
XRCC1-201ENST00000262887 PIGWQ7Z7B1 504 aa16.33■□□□□ 0.2
XRCC1-201ENST00000262887 MYOCDQ8IZQ8 938 aa16.33■□□□□ 0.2
XRCC1-201ENST00000262887 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
XRCC1-201ENST00000262887 DDX12PQ92771 950 aa16.33■□□□□ 0.2
XRCC1-201ENST00000262887 IL17RBQ9NRM6 502 aa16.33■□□□□ 0.2
XRCC1-201ENST00000262887 ATP8A2Q9NTI2 1148 aa16.33■□□□□ 0.2
XRCC1-201ENST00000262887 AIPL1Q9NZN9 384 aa16.33■□□□□ 0.2
XRCC1-201ENST00000262887 TTI1O43156 1089 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 SLMAPQ14BN4 828 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 HOOK3Q86VS8 718 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 METTL13Q8N6R0 699 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 PNMA5Q96PV4 448 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 ZMYND12Q9H0C1 365 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 DPH5Q9H2P9 285 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 SLITRK6Q9H5Y7 841 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 KANSL2Q9H9L4 492 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 FAM114A2Q9NRY5 505 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 SAMD15Q9P1V8 674 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 SHANK3Q9BYB0 1731 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 CCDC88AQ3V6T2 1871 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 WTIPA6NIX2 430 aaPredicted RBP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 CAND2O75155 1236 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 ITGA4P13612 1032 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 SF3A3Q12874 501 aaKnown RBP eCLIP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 FAM133BQ5BKY9 247 aaKnown RBP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 BORCS6Q96GS4 357 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 SLC4A9Q96Q91 983 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 NOP53Q9NZM5 478 aaKnown RBP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 ATP8A1Q9Y2Q0 1164 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 UTP11Q9Y3A2 253 aaKnown RBP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 EME2A4GXA9 379 aaPredicted RBP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 EPS15P42566 896 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 PSMD2Q13200 908 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 TRPM8Q7Z2W7 1104 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 TBCKQ8TEA7 893 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 AGAP11Q8TF27 550 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms