RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 FCGRTP55899 365 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 TRIP13Q15645 432 aaPredicted RBP17.11■□□□□ 0.33
SHANK3-201ENST00000262795 KIAA1755Q5JYT7 1200 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 ATP10DQ9P241 1426 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 PBRM1Q86U86 1689 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 CARMIL3Q8ND23 1372 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 NFKBIAP25963 317 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 IFT20Q8IY31 132 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 SMYD4Q8IYR2 804 aaPredicted RBP17.11■□□□□ 0.33
SHANK3-201ENST00000262795 MAIP1Q8WWC4 291 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 METP08581 1390 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 DNAJC6O75061 913 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 TXNP10599 105 aaKnown RBP17.11■□□□□ 0.33
SHANK3-201ENST00000262795 SP100P23497 879 aaPredicted RBP17.11■□□□□ 0.33
SHANK3-201ENST00000262795 FAM186BQ8IYM0 893 aa17.11■□□□□ 0.33
SHANK3-201ENST00000262795 GCOM2Q9BZD3 368 aaPredicted RBP17.11■□□□□ 0.33
SHANK3-201ENST00000262795 NGRNQ9NPE2 291 aaKnown RBP17.11■□□□□ 0.33
SHANK3-201ENST00000262795 ALDH1A1P00352 501 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 ST8SIA6P61647 398 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 BEST2Q8NFU1 509 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 ERO1AQ96HE7 468 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 TPX2Q9ULW0 747 aaKnown RBP17.1■□□□□ 0.33
SHANK3-201ENST00000262795 RNF168Q8IYW5 571 aaPredicted RBP17.1■□□□□ 0.33
SHANK3-201ENST00000262795 LCP1P13796 627 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 RUFY4Q6ZNE9 571 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 SPDL1Q96EA4 605 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 ABCC4O15439 1325 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 GNGT2O14610 69 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 RASSF7Q02833 373 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 BTBD8Q5XKL5 378 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 ZCWPW1Q9H0M4 648 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 ADGRL3Q9HAR2 1447 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 CLDN3O15551 220 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 TACO1Q9BSH4 297 aaKnown RBP17.1■□□□□ 0.33
SHANK3-201ENST00000262795 USH1CQ9Y6N9 552 aa17.1■□□□□ 0.33
SHANK3-201ENST00000262795 CDKL2Q92772 493 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 PCDHA8Q9Y5H6 950 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 GMPSP49915 693 aaPredicted RBP17.09■□□□□ 0.33
SHANK3-201ENST00000262795 SMC5Q8IY18 1101 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 BSDC1Q9NW68 430 aaPredicted RBP17.09■□□□□ 0.33
SHANK3-201ENST00000262795 GPC3P51654 580 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 ADCK2Q7Z695 626 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 SLC44A5Q8NCS7 719 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 GABBR1Q9UBS5 961 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 CLIC4Q9Y696 253 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 KDM6BO15054 1643 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 PTPRKQ15262 1439 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 CASQ2O14958 399 aaPredicted RBP17.09■□□□□ 0.33
SHANK3-201ENST00000262795 GFPT2O94808 682 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 PTK2BQ14289 1009 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 MAPK6Q16659 721 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 VSIG1Q86XK7 387 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 FSD1LQ9BXM9 530 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 CAPN10Q9HC96 672 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 STK38LQ9Y2H1 464 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 ME3Q16798 604 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 TAS2R42Q7RTR8 314 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 RAD18Q9NS91 495 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 DFFAO00273 331 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 SGSM2O43147 1006 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 FOXP4Q8IVH2 680 aaPredicted RBP17.09■□□□□ 0.33
SHANK3-201ENST00000262795 LARP4BQ92615 738 aaKnown RBP17.09■□□□□ 0.33
SHANK3-201ENST00000262795 NDFIP2Q9NV92 336 aa17.09■□□□□ 0.33
SHANK3-201ENST00000262795 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 HNRNPCL2B2RXH8 293 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 HNRNPCL1O60812 293 aaKnown RBP17.08■□□□□ 0.33
SHANK3-201ENST00000262795 YME1L1Q96TA2 773 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 TOPORSQ9NS56 1045 aaPredicted RBP17.08■□□□□ 0.33
SHANK3-201ENST00000262795 ATG3Q9NT62 314 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 MYO1FO00160 1098 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 MCF2LO15068 1137 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 ZMYND10O75800 440 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 PRDX5P30044 214 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 PEX19P40855 299 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 SPATA2LQ8IUW3 424 aaPredicted RBP17.08■□□□□ 0.33
SHANK3-201ENST00000262795 MLKLQ8NB16 471 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 EDEM3Q9BZQ6 932 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 ATP6V0A4Q9HBG4 840 aa17.08■□□□□ 0.33
SHANK3-201ENST00000262795 PPFIBP2Q8ND30 876 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 CXorf38Q8TB03 319 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 DEPDC1BQ8WUY9 529 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 CELF1Q92879 486 aaKnown RBP17.08■□□□□ 0.32
SHANK3-201ENST00000262795 SP110Q9HB58 689 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 STAT3P40763 770 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 ANKRD13CQ8N6S4 541 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 KIF12Q96FN5 646 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 HPS4Q9NQG7 708 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 CYBBP04839 570 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 TRIM68Q6AZZ1 485 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 SPOPLQ6IQ16 392 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 GRK7Q8WTQ7 553 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.32
SHANK3-201ENST00000262795 GIMAP8Q8ND71 665 aaPredicted RBP17.08■□□□□ 0.32
SHANK3-201ENST00000262795 PUS7LQ9H0K6 701 aaKnown RBP17.08■□□□□ 0.32
SHANK3-201ENST00000262795 MOCS3O95396 460 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms