RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 MGAT3Q09327 533 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 TMEM62Q0P6H9 643 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 TRIM67Q6ZTA4 783 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 CLP1Q92989 425 aaKnown RBP15.89■□□□□ 0.13
DDX39A-201ENST00000242776 RPGRIP1Q96KN7 1286 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 INPP4AQ96PE3 977 aaPredicted RBP15.89■□□□□ 0.13
DDX39A-201ENST00000242776 FAM49AQ9H0Q0 323 aaPredicted RBP15.89■□□□□ 0.13
DDX39A-201ENST00000242776 EHMT1Q9H9B1 1298 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 RC3H2Q9HBD1 1191 aaKnown RBP15.89■□□□□ 0.13
DDX39A-201ENST00000242776 NRCAMQ92823 1304 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 PNMA6FA0A0J9YX94 578 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 DGKIO75912 1065 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 RBM10P98175 930 aaKnown RBP15.88■□□□□ 0.13
DDX39A-201ENST00000242776 GRM4Q14833 912 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 GRIK4Q16099 956 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 FBXO47Q5MNV8 452 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 USP17L6PQ6QN14 398 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 RSPH3Q86UC2 560 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 SUGP1Q8IWZ8 645 aaKnown RBP15.88■□□□□ 0.13
DDX39A-201ENST00000242776 SAMD3Q8N6K7 520 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 KLHL23Q8NBE8 558 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 SMARCC2Q8TAQ2 1214 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 POF1BQ8WVV4 589 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 LINC01599Q8WXQ3 324 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 ZNF689Q96CS4 500 aaPredicted RBP15.88■□□□□ 0.13
DDX39A-201ENST00000242776 DSCC1Q9BVC3 393 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 AGO3Q9H9G7 860 aaKnown RBP15.88■□□□□ 0.13
DDX39A-201ENST00000242776 CLEC1BQ9P126 229 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 TUBE1Q9UJT0 475 aa15.88■□□□□ 0.13
DDX39A-201ENST00000242776 IFIT3O14879 490 aaKnown RBP15.87■□□□□ 0.13
DDX39A-201ENST00000242776 PER2O15055 1255 aa15.87■□□□□ 0.13
DDX39A-201ENST00000242776 PTPN5P54829 565 aa15.87■□□□□ 0.13
DDX39A-201ENST00000242776 TICAM2Q86XR7 235 aa15.87■□□□□ 0.13
DDX39A-201ENST00000242776 SPPL3Q8TCT6 385 aa15.87■□□□□ 0.13
DDX39A-201ENST00000242776 MSLNLQ96KJ4 702 aa15.87■□□□□ 0.13
DDX39A-201ENST00000242776 IL25Q9H293 177 aa15.87■□□□□ 0.13
DDX39A-201ENST00000242776 RIOX1Q9H6W3 641 aa15.87■□□□□ 0.13
DDX39A-201ENST00000242776 ATP9AO75110 1047 aa15.86■□□□□ 0.13
DDX39A-201ENST00000242776 SP100P23497 879 aaPredicted RBP15.86■□□□□ 0.13
DDX39A-201ENST00000242776 ZXDAP98168 799 aa15.86■□□□□ 0.13
DDX39A-201ENST00000242776 SPOUT1Q5T280 376 aaKnown RBP15.86■□□□□ 0.13
DDX39A-201ENST00000242776 TSHZ1Q6ZSZ6 1077 aa15.86■□□□□ 0.13
DDX39A-201ENST00000242776 RTN4RL1Q86UN2 441 aaPredicted RBP15.86■□□□□ 0.13
DDX39A-201ENST00000242776 MICAL1Q8TDZ2 1067 aa15.86■□□□□ 0.13
DDX39A-201ENST00000242776 GLG1Q92896 1179 aa15.86■□□□□ 0.13
DDX39A-201ENST00000242776 PPP2R3CQ969Q6 453 aa15.86■□□□□ 0.13
DDX39A-201ENST00000242776 USP15Q9Y4E8 981 aaPredicted RBP15.86■□□□□ 0.13
DDX39A-201ENST00000242776 FRMPD4Q14CM0 1322 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 HIP1O00291 1037 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 STAM2O75886 525 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 GLP2RO95838 553 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 NT5C2P49902 561 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 VCPP55072 806 aaKnown RBP15.85■□□□□ 0.13
DDX39A-201ENST00000242776 MRPS6P82932 125 aaKnown RBP15.85■□□□□ 0.13
DDX39A-201ENST00000242776 TCF15Q12870 199 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 TRAF1Q13077 416 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 TAF2Q6P1X5 1199 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 NLRX1Q86UT6 975 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 CUL5Q93034 780 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 APOL5Q9BWW9 433 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 PLVAPQ9BX97 442 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 USP34Q70CQ2 3546 aa15.85■□□□□ 0.13
DDX39A-201ENST00000242776 GSTTP1A0A1W2PQM5 241 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 ERICH2A1L162 156 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 TRDNQ13061 729 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 MARCH8Q5T0T0 291 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 CASC1Q6TDU7 716 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 EFHBQ8N7U6 833 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 SMRP1Q8NCR6 262 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 TRAPPC12Q8WVT3 735 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 ZDBF2Q9HCK1 2354 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 LOC730098B7Z3J9 87 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 EYA4O95677 639 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 WTAPQ15007 396 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 TMEM266Q2M3C6 531 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 PCNX4Q63HM2 1172 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 BMP8AQ7Z5Y6 402 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 NPAS4Q8IUM7 802 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 CMTR2Q8IYT2 770 aaKnown RBP15.84■□□□□ 0.13
DDX39A-201ENST00000242776 FBXL6Q8N531 539 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 P2RX5Q93086 422 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 MYL10Q9BUA6 226 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 TLE6Q9H808 572 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 ERAP1Q9NZ08 941 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 LRFN2Q9ULH4 789 aa15.84■□□□□ 0.13
DDX39A-201ENST00000242776 FNDC1Q4ZHG4 1894 aaPredicted RBP15.83■□□□□ 0.12
DDX39A-201ENST00000242776 GFRA3O60609 400 aa15.83■□□□□ 0.12
DDX39A-201ENST00000242776 CDC45O75419 566 aa15.83■□□□□ 0.12
DDX39A-201ENST00000242776 KCNA2P16389 499 aa15.83■□□□□ 0.12
DDX39A-201ENST00000242776 PAK2Q13177 524 aa15.83■□□□□ 0.12
DDX39A-201ENST00000242776 SEPT1Q8WYJ6 367 aa15.83■□□□□ 0.12
DDX39A-201ENST00000242776 HCSTQ9UBK5 93 aa15.83■□□□□ 0.12
DDX39A-201ENST00000242776 PADI3Q9ULW8 664 aa15.83■□□□□ 0.12
DDX39A-201ENST00000242776 TRPC6Q9Y210 931 aa15.83■□□□□ 0.12
DDX39A-201ENST00000242776 GINS2Q9Y248 185 aa15.83■□□□□ 0.12
DDX39A-201ENST00000242776 TAF6LQ9Y6J9 622 aa15.83■□□□□ 0.12
DDX39A-201ENST00000242776 M0QZ92 97 aa15.82■□□□□ 0.12
DDX39A-201ENST00000242776 ST18O60284 1047 aa15.82■□□□□ 0.12
DDX39A-201ENST00000242776 SCG2P13521 617 aa15.82■□□□□ 0.12
DDX39A-201ENST00000242776 INSRRP14616 1297 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms