RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 RGL1Q9NZL6 768 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 PP2D1A8MPX8 630 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 F2P00734 622 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 CAPN2P17655 700 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 CDC25AP30304 524 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 EPHA7Q15375 998 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 UGCGQ16739 394 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 ATL3Q6DD88 541 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 SMARCAD1Q9H4L7 1026 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 C11orf49Q9H6J7 331 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 STARD7Q9NQZ5 370 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 CFAP45Q9UL16 551 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 GRIN2DO15399 1336 aa16.87■□□□□ 0.29
RPA3-201ENST00000223129 WDR81Q562E7 1941 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 PSEN2P49810 448 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 ATN1P54259 1190 aaPredicted RBP16.86■□□□□ 0.29
RPA3-201ENST00000223129 MFSD10Q14728 455 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 KIAA0753Q2KHM9 967 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 NECAB2Q7Z6G3 386 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 IGSF22Q8N9C0 903 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 RDM1Q8NG50 284 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 DYDC2Q96IM9 177 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 CLIC6Q96NY7 704 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 EIF2AK1Q9BQI3 630 aaKnown RBP16.86■□□□□ 0.29
RPA3-201ENST00000223129 RNPEPQ9H4A4 650 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 LRWD1Q9UFC0 647 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 FBXO2Q9UK22 296 aaPredicted RBP16.86■□□□□ 0.29
RPA3-201ENST00000223129 EMSYQ7Z589 1322 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 SPTLC2O15270 562 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 CABYRO75952 493 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 YEATS4O95619 227 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 ATP4AP20648 1035 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 KRT85P78386 507 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 CYP4A11Q02928 519 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 CTTNQ14247 550 aaKnown RBP16.86■□□□□ 0.29
RPA3-201ENST00000223129 PDIA5Q14554 519 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 NBPF20Q3BBV1 942 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 FAM160B1Q5W0V3 765 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 PDXDC2PQ6P474 469 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 PLPPR4Q7Z2D5 763 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 UBE2Q1Q7Z7E8 422 aa16.86■□□□□ 0.29
RPA3-201ENST00000223129 MAFBQ9Y5Q3 323 aaPredicted RBP16.86■□□□□ 0.29
RPA3-201ENST00000223129 HAS3O00219 553 aa16.85■□□□□ 0.29
RPA3-201ENST00000223129 SLITRK3O94933 977 aa16.85■□□□□ 0.29
RPA3-201ENST00000223129 ITGA7Q13683 1181 aa16.85■□□□□ 0.29
RPA3-201ENST00000223129 SPECC1Q5M775 1068 aa16.85■□□□□ 0.29
RPA3-201ENST00000223129 AFAP1L1Q8TED9 768 aa16.85■□□□□ 0.29
RPA3-201ENST00000223129 GDPD2Q9HCC8 539 aa16.85■□□□□ 0.29
RPA3-201ENST00000223129 ERAP1Q9NZ08 941 aa16.85■□□□□ 0.29
RPA3-201ENST00000223129 WRAP73Q9P2S5 460 aaPredicted RBP16.85■□□□□ 0.29
RPA3-201ENST00000223129 ZNF215Q9UL58 517 aaPredicted RBP16.85■□□□□ 0.29
RPA3-201ENST00000223129 SRPRBQ9Y5M8 271 aaKnown RBP16.85■□□□□ 0.29
RPA3-201ENST00000223129 MYH9P35579 1960 aaKnown RBP16.85■□□□□ 0.29
RPA3-201ENST00000223129 SCN10AQ9Y5Y9 1956 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 ZNF862O60290 1169 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 P4HBP07237 508 aaKnown RBP16.84■□□□□ 0.29
RPA3-201ENST00000223129 TPH2Q8IWU9 490 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 TNPO1Q92973 898 aaKnown RBP16.84■□□□□ 0.29
RPA3-201ENST00000223129 HSD17B14Q9BPX1 270 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 RAB34Q9BZG1 259 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 CSRNP2Q9H175 543 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 RCOR1Q9UKL0 485 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 IGSF9BQ9UPX0 1349 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 A0A087WWV3 80 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 PPP6R2O75170 966 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 MED24O75448 989 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 PLCB4Q15147 1175 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 SLC39A5Q6ZMH5 540 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 CATSPER3Q86XQ3 398 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 CKAP2LQ8IYA6 745 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 LXNQ9BS40 222 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 KATNAL1Q9BW62 490 aa16.84■□□□□ 0.29
RPA3-201ENST00000223129 SPATA31C1P0DKV0 1188 aa16.83■□□□□ 0.28
RPA3-201ENST00000223129 QARSP47897 775 aaKnown RBP16.83■□□□□ 0.28
RPA3-201ENST00000223129 PSMC5P62195 406 aa16.83■□□□□ 0.28
RPA3-201ENST00000223129 FAM47CQ5HY64 1035 aa16.83■□□□□ 0.28
RPA3-201ENST00000223129 KRI1Q8N9T8 703 aaKnown RBP16.83■□□□□ 0.28
RPA3-201ENST00000223129 LEO1Q8WVC0 666 aaPredicted RBP16.83■□□□□ 0.28
RPA3-201ENST00000223129 SPATA32Q96LK8 384 aa16.83■□□□□ 0.28
RPA3-201ENST00000223129 HDAC6Q9UBN7 1215 aa16.83■□□□□ 0.28
RPA3-201ENST00000223129 A0A0U1RQG5 324 aaPredicted RBP16.82■□□□□ 0.28
RPA3-201ENST00000223129 TMEM150BA6NC51 233 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 ZBTB39O15060 712 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 CAPN15O75808 1086 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 LONP1P36776 959 aaKnown RBP16.82■□□□□ 0.28
RPA3-201ENST00000223129 ECM1Q16610 540 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 USP49Q70CQ1 688 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 C7orf31Q8N865 590 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 SNX29Q8TEQ0 813 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 ATP6V0A1Q93050 837 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 MMTAG2Q9BU76 263 aaKnown RBP16.82■□□□□ 0.28
RPA3-201ENST00000223129 TRPC6Q9Y210 931 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 MORC2Q9Y6X9 1032 aaPredicted RBP16.82■□□□□ 0.28
RPA3-201ENST00000223129 POTEB3A0JP26 581 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 ARVCFO00192 962 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 SMIM10L2AP0DMW4 78 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 SMIM10L2BP0DMW5 78 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 CCT6AP40227 531 aaKnown RBP16.82■□□□□ 0.28
RPA3-201ENST00000223129 ME1P48163 572 aa16.82■□□□□ 0.28
RPA3-201ENST00000223129 PRKCEQ02156 737 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms