RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 GIT2Q14161 759 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 FAM133AQ8N9E0 248 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 BRI3BPQ8WY22 251 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 P2RX5Q93086 422 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 NACC1Q96RE7 527 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 POTEB2H3BUK9 544 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CCNE2O96020 404 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 P4HBP07237 508 aaKnown RBP21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 KCNA2P16389 499 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CCNE1P24864 410 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ERVK-9P63128 1117 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ERVK-24P63145 666 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 FAM26FQ5R3K3 315 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 GUF1Q8N442 669 aaKnown RBP21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PCDHA2Q9Y5H9 948 aa21.87■■□□□ 1.09
TNFRSF1A-201ENST00000162749 BTBD19C9JJ37 291 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PDHXO00330 501 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 COPB2P35606 906 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 KRT76Q01546 638 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 STXBP2Q15833 593 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 GNPTABQ3T906 1256 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 SPRYD7Q5W111 196 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 RINT1Q6NUQ1 792 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 LRRC8AQ8IWT6 810 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CDHR1Q96JP9 859 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 SLC45A1Q9Y2W3 748 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PLXNA1Q9UIW2 1896 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 SOWAHBA6NEL2 793 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ZBTB48P10074 688 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 FILIP1Q7Z7B0 1213 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 SMCR8Q8TEV9 937 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 TRIM47Q96LD4 638 aa21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ADD3Q9UEY8 706 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PLXNB2O15031 1838 aa21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 WDR64B1ANS9 1081 aa21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 EIF3JO75822 258 aaKnown RBP21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 EDNRBP24530 442 aa21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 HERC4Q5GLZ8 1057 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ANKRD40Q6AI12 368 aa21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CENPPQ6IPU0 288 aa21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 DUSP9Q99956 384 aaKnown RBP21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 FGFBP2Q9BYJ0 223 aa21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 SEMA6BQ9H3T3 888 aa21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ZSWIM4Q9H7M6 989 aa21.85■■□□□ 1.09
TNFRSF1A-201ENST00000162749 A0A1B0GTH6 734 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 BICDL2A1A5D9 508 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 SPATA31C2B4DYI2 1134 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 SFNP31947 248 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 QARSP47897 775 aaKnown RBP21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 JAK3P52333 1124 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 LRRC41Q15345 812 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 IRF2BP1Q8IU81 584 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 BCAS3Q9H6U6 928 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 TBC1D7Q9P0N9 293 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ZNF746Q6NUN9 644 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 C1orf186Q6ZWK4 172 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 TMC6Q7Z403 805 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 GTF3C2Q8WUA4 911 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PRIMPOLQ96LW4 560 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 MROH8Q9H579 483 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PCNTO95613 3336 aa21.84■■□□□ 1.09
TNFRSF1A-201ENST00000162749 RSPH10B2B2RC85 870 aa21.83■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PGK2P07205 417 aa21.83■■□□□ 1.09
TNFRSF1A-201ENST00000162749 RSPH10BP0C881 870 aa21.83■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CHADLQ6NUI6 762 aa21.83■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ANKRD23Q86SG2 305 aa21.83■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PORCNQ9H237 461 aa21.83■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ZHX3Q9H4I2 956 aa21.83■■□□□ 1.09
TNFRSF1A-201ENST00000162749 TCEAL9Q9UHQ7 104 aa21.83■■□□□ 1.09
TNFRSF1A-201ENST00000162749 NFASCO94856 1347 aa21.83■■□□□ 1.09
TNFRSF1A-201ENST00000162749 KCTD2Q14681 263 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 NR1I3Q14994 352 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 UGCGQ16739 394 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 PTPN21Q16825 1174 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 TCP11X2Q5H9J9 407 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 VSTM4Q8IW00 320 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 MYOCDQ8IZQ8 938 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 CSGALNACT2Q8N6G5 542 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 MYRIPQ8NFW9 859 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 CTAGE1Q96RT6 745 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SENP7Q9BQF6 1050 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SRRTQ9BXP5 876 aaKnown RBP21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 IMPACTQ9P2X3 320 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 ARID2Q68CP9 1835 aa21.83■■□□□ 1.08
TNFRSF1A-201ENST00000162749 DNAJC25-GNG10A0A024R161 153 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 LRRC10BA6NIK2 292 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 KCNJ18B7U540 433 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 ICAM3P32942 547 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 HUNKP57058 714 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SPAG1Q07617 926 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 KCNJ12Q14500 433 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 KRT31Q15323 416 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SHCBP1Q8NEM2 672 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 RDM1Q8NG50 284 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 EEF2KMTQ96G04 330 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 FGD4Q96M96 766 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 MMP19Q99542 508 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 THAP9Q9H5L6 903 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 JPH1Q9HDC5 661 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms