RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Exoc1Q8R3S6 894 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Haus2Q9CQS9 234 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 RnmtQ9D0L8 465 aaKnown RBP15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Gm5934D3Z4U6 212 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Zfp597E9Q6S0 419 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Lig1P37913 916 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Mrps31Q61733 384 aaKnown RBP15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Trim47Q8C0E3 641 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Fam20aQ8CID3 541 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Stap2Q8R0L1 411 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Rpap2Q8VC34 614 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Dnajc18Q9CZJ9 357 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Ccdc105Q9D4K7 499 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Mipol1Q9D9F8 279 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Tmod4Q9JLH8 345 aa15.79■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Lamb2Q61292 1799 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Gm10378F6XQQ1 160 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 AurkbO70126 345 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Abcb4P21440 1276 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Cbx2P30658 519 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Cdr2P97817 455 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Atp11aP98197 1187 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Lmntd2Q0VET5 664 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Nlrp4cQ3TKR3 982 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Rasip1Q3U0S6 961 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Krt14Q61781 484 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Cracr2bQ80ZJ8 394 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Rtp1Q8C8C1 263 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Rbm41Q8JZV4 413 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Usp33Q8R5K2 909 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Rhobtb2Q91V93 728 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Apopt1Q9CQW7 192 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Bcs1lQ9CZP5 418 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Extl3Q9WVL6 918 aa15.78■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Gm4985A2ALC6 410 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 SpibO35906 267 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Serpinb2P12388 415 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Cxcl9P18340 126 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Abcd1P48410 736 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Kcna2P63141 499 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Stim2P83093 746 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Taf1bP97358 586 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Pou2f2Q00196 463 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Znhit6Q3UFB2 460 aaKnown RBP15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Vwa3aQ3UVV9 1148 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 TxlnaQ6PAM1 554 aaKnown RBP15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Lrrn2Q6PHP6 730 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Cyp26b1Q811W2 512 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Zdhhc15Q8BGJ0 337 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 PpatQ8CIH9 517 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Syne4Q8CII8 388 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 NapgQ9CWZ7 312 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Phtf1Q9QZ09 761 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Atp1a4Q9WV27 1032 aa15.77■□□□□ 0.12
Ssr1-204ENSMUST00000225319 Disp2Q8CIP5 1345 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Myh11O08638 1972 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Vmn2r79E9Q067 851 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 AunipE9Q6Z5 340 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Mdh1P14152 334 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Ccnd3P30282 292 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Atoh1P48985 351 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Epb41l4aP52963 686 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Trim43cP86449 446 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 P4ha1Q60715 534 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Fndc3bQ6NWW9 1207 aaKnown RBP15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Slc45a1Q8BIV7 751 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Dclk3Q8BWQ5 790 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Spata4Q8K3V1 295 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 IrgqQ8VIM9 583 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Rrp1bQ91YK2 724 aaKnown RBP15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 CutaQ9CQ89 177 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Fam217aQ9D9W6 419 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Cabp5Q9JLK3 173 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Gm4907B1AXB9 411 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Atp9aO70228 1047 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 AgtP11859 477 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Slc9a2Q3ZAS0 814 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Scarf1Q5ND28 820 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Tsr1Q5SWD9 803 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Slain1Q68FF7 579 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Mindy1Q76LS9 468 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 PicalmQ7M6Y3 660 aaKnown RBP15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Klhl10Q9D5V2 608 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 PpihQ9D868 188 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 PycardQ9EPB4 193 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Dnajc7Q9QYI3 494 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Tex21Q9R0U9 575 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Mrvi1Q9WUX5 899 aaKnown RBP15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Bub1bQ9Z1S0 1052 aa15.76■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Gm45208A0A140LJ36 292 aa15.75■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Kif3cO35066 796 aa15.75■□□□□ 0.11
Ssr1-204ENSMUST00000225319 ByslO54825 436 aaKnown RBP15.75■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Gjd2O54851 321 aa15.75■□□□□ 0.11
Ssr1-204ENSMUST00000225319 MyocO70624 490 aa15.75■□□□□ 0.11
Ssr1-204ENSMUST00000225319 PtgdrP70263 357 aa15.75■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Eepd1Q3TGW2 569 aa15.75■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Tmem35bQ3U0Y2 150 aa15.75■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Slc16a10Q3U9N9 512 aa15.75■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Gm10392Q3V3I3 114 aa15.75■□□□□ 0.11
Ssr1-204ENSMUST00000225319 Cep112Q5PR68 954 aa15.75■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms