RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Pou2f2Q00196 463 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Zfp781Q0P5U5 243 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Gpatch11Q3UFS4 262 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Gm10392Q3V3I3 114 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Cacna2d4Q5RJF7 1116 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Nsun6Q7TS68 476 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Trnp1Q80ZI1 223 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Cyp4f39Q8BGU0 532 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 PpatQ8CIH9 517 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Adcy3Q8VHH7 1145 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ranbp17Q99NF8 1088 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 CenpqQ9CPQ5 267 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Gjd2O54851 321 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 UgcgO88693 394 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Serpinb2P12388 415 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Dnm2P39054 870 aaKnown RBP17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Tpm1P58771 284 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Spdye4aQ5IBH6 268 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 PodnQ7TQ62 611 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Necab1Q8BG18 352 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Lrrc24Q8BHA1 521 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 GanQ8CA72 597 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Bbs7Q8K2G4 715 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 RnpepQ8VCT3 650 aaKnown RBP17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Smtnl1Q99LM3 459 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 YwhabQ9CQV8 246 aaKnown RBP17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Apopt1Q9CQW7 192 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Tmem192Q9CXT7 266 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Bcl11aQ9QYE3 773 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Vstm4T1NXB5 319 aa17.25■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Dhtkd1A2ATU0 921 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Celf5D3Z4T1 395 aaKnown RBP17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 NcapgE9PWG6 1004 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Magea4F2Z493 315 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Got1P05201 413 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 P4hbP09103 509 aaKnown RBP17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Cxcl9P18340 126 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Gna14P30677 355 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Cdkn1cP49919 348 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ogfod1Q3U0K8 545 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Slc16a10Q3U9N9 512 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Rnf207Q3V3A7 635 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ovgp1Q62010 721 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ppp1r13bQ62415 1087 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Mei4Q8BRM6 389 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 EtnpplQ8BWU8 499 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Mrpl58Q8R035 206 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Itm2cQ91VK4 269 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ears2Q9CXJ1 523 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Klhl10Q9D5V2 608 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Klhl40Q9D783 621 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Eef1gQ9D8N0 437 aaKnown RBP17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ndst4Q9EQW8 872 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Arhgef7Q9ES28 862 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Add1Q9QYC0 735 aaKnown RBP17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Sorbs3Q9R1Z8 733 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 DexiQ9WUQ7 95 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Bub1bQ9Z1S0 1052 aa17.24■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Gm1993A6X8I0 212 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 SlxD3Z347 212 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Slc16a2O70324 545 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Cyp11b2P15539 500 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Wdr70Q3TWF6 657 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Eif3j1Q3UGC7 261 aaKnown RBP17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Trappc3lQ4KL14 181 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Antxr2Q6DFX2 487 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Slc45a1Q8BIV7 751 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Rcor2Q8C796 523 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Kiaa0391Q8JZY4 584 aaKnown RBP17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Sgms1Q8VCQ6 419 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Prpf6Q91YR7 941 aaKnown RBP17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Nxf1Q99JX7 618 aaKnown RBP17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 2310002L09RikQ9D7L5 217 aa17.23■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ttc38A3KMP2 465 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Sec14l1A8Y5H7 715 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Exoc4O35382 975 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Timm44O35857 452 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ly9Q01965 654 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Mrgprb1Q3UG61 350 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Gm1587Q3UT80 123 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Olfm4Q3UZZ4 505 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Tpm4Q6IRU2 248 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Rhbdf1Q6PIX5 856 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ankrd24Q80VM7 985 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Traf3ip3Q8C0G2 513 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Pnma1Q8C1C8 353 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Adgra1Q8C4G9 578 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Bcas3Q8CCN5 928 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Enox2Q8R0Z2 598 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Lpin2Q99PI5 893 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Rpap3Q9D706 660 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Pex11aQ9Z211 246 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Cntnap2Q9CPW0 1332 aa17.22■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Gm45194A0A140LJG2 572 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ccdc121E9Q6D3 323 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Cetn3O35648 167 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 MafgO54790 162 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Nmt1O70310 496 aaKnown RBP17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Ptgs1P22437 602 aa17.21■□□□□ 0.35
Ubp1-206ENSMUST00000216558 Etv6P97360 485 aa17.21■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms