RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Rpn1Q91YQ5 608 aaKnown RBP16.37■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Dhx30Q99PU8 1217 aaKnown RBP16.37■□□□□ 0.21
Ercc1-201ENSMUST00000003645 BccipQ9CWI3 316 aa16.37■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Ddah1Q9CWS0 285 aa16.37■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Git2Q9JLQ2 708 aa16.37■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Sucla2Q9Z2I9 463 aa16.37■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Ms4a4aA0A087WRT7 236 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 A0A1L1SQF0 893 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Gm4907B1AXB9 411 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Gm13128L7MU96 475 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Bin1O08539 588 aaKnown RBP16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Tlk2O55047 718 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Cd70O55237 195 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Slc16a2O70324 545 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Etv6P97360 485 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Tarbp2P97473 365 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Cep126Q0VBV7 1103 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Tnfaip8l3Q3TBL6 204 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Ppp1r13bQ62415 1087 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Pramel7Q810Y8 479 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Ipo5Q8BKC5 1097 aaKnown RBP16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Mrgprx1Q8CIP3 322 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Plekha4Q8VC98 588 aa16.36■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Gm15262A0A140LIQ5 728 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Bpifb4A2BGH0 617 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 TroapB7ZNG4 668 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Klhl33G3UW92 533 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Atp2b1G5E829 1220 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 AurkbO70126 345 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Sept4P28661 478 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Irf3P70671 419 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Casp7P97864 303 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Srd5a1Q68FF9 255 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Asic1Q6NXK8 526 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Snx13Q6PHS6 957 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Plppr4Q7TME0 766 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Zbtb5Q7TQG0 670 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Map1sQ8C052 973 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Golph3lQ8R088 285 aaKnown RBP16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Tspan8Q8R3G9 235 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Ubxn11Q9D572 484 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Nudt5Q9JKX6 218 aa16.35■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Gm7168A0AUV4 508 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Stx1aO35526 288 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Orc4O88708 433 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Cd68P31996 326 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Rsad1Q5SUV1 442 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Icam5Q60625 917 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Nacc1Q7TSZ8 514 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Ttc27Q8CD92 847 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Eps8l1Q8R5F8 716 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Xpo5Q924C1 1204 aaKnown RBP16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Cdc42ep5Q9Z0X0 150 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Atp12aQ9Z1W8 1035 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 RptorQ8K4Q0 1335 aa16.34■□□□□ 0.21
Ercc1-201ENSMUST00000003645 Cyp2j7A0A140T8U1 504 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ttll6A4Q9E8 822 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ace3D0G895 737 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Cfap73J3QPZ5 306 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Idh1O88844 414 aaKnown RBP16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Tal1P22091 329 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 DmpkP54265 631 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Cyp2c37P56654 490 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 RenbpP82343 430 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Kcnma1Q08460 1209 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Clul1Q3ZRW6 464 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Fkbp3Q62446 224 aaKnown RBP16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Cyp2c54Q6XVG2 490 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 PhkbQ7TSH2 1085 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ccdc38Q8CDN8 563 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Cacnb1Q8R3Z5 597 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Rpap2Q8VC34 614 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Kri1Q8VDQ9 704 aaKnown RBP16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Itgbl1Q8VDV0 494 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Plcb4Q91UZ1 1175 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Ankrd54Q91WK7 299 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Cyp2c50Q91X77 490 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 NptxrQ99J85 493 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 RnmtQ9D0L8 465 aaKnown RBP16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Atad5Q4QY64 1826 aa16.33■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Kmt2eQ3UG20 1868 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Clk2O35491 499 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Axin2O88566 840 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Got1P05201 413 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Usp25P57080 1055 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Col9a2Q07643 688 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Mcm7Q61881 719 aaKnown RBP16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Mcf2lQ64096 1149 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Msantd2Q6NZR2 559 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Podnl1Q6P3Y9 559 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Hook2Q7TMK6 716 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Txndc16Q7TN22 820 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Tbc1d10bQ8BHL3 798 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Fbxo44Q8BK26 255 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 N4bp3Q8C7U1 537 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Phtf2Q8CB19 747 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Apol10aQ8CCA5 318 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 MafaQ8CF90 359 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Vmn1r203Q8R273 311 aa16.32■□□□□ 0.2
Ercc1-201ENSMUST00000003645 Pstpip2Q99M15 334 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms