RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 CTAGE3PQ8IX95 158 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 LMNTD2Q8IXW0 634 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 DEPTORQ8TB45 409 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 TCP11Q8WWU5 503 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 TBC1D31Q96DN5 1066 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 UBE2TQ9NPD8 197 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-210ENST00000638567 HMGB1P1B2RPK0 211 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-210ENST00000638567 CFAP157Q5JU67 520 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 NOA1Q8NC60 698 aaKnown RBP18.09■□□□□ 0.49
SCARB2-210ENST00000638567 NEK9Q8TD19 979 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 NACC1Q96RE7 527 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 CCSER1Q9C0I3 900 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 CCPG1Q9ULG6 757 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 GINS2Q9Y248 185 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 DEPDC5O75140 1603 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 TNS3Q68CZ2 1445 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 POTEB3A0JP26 581 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 POTECB2RU33 542 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 KAZNQ674X7 775 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 CCDC62Q6P9F0 684 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 POTEBQ6S5H4 581 aa18.09■□□□□ 0.49
SCARB2-210ENST00000638567 NSUN4Q96CB9 384 aaKnown RBP18.09■□□□□ 0.49
SCARB2-210ENST00000638567 TYW1Q9NV66 732 aaKnown RBP18.09■□□□□ 0.49
SCARB2-210ENST00000638567 ZNF335Q9H4Z2 1342 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-210ENST00000638567 CTTNQ14247 550 aaKnown RBP18.08■□□□□ 0.49
SCARB2-210ENST00000638567 E2F5Q15329 346 aa18.08■□□□□ 0.49
SCARB2-210ENST00000638567 MICAL1Q8TDZ2 1067 aa18.08■□□□□ 0.49
SCARB2-210ENST00000638567 SUGCTQ9HAC7 445 aa18.08■□□□□ 0.49
SCARB2-210ENST00000638567 RAB20Q9NX57 234 aa18.08■□□□□ 0.49
SCARB2-210ENST00000638567 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.08■□□□□ 0.49
SCARB2-210ENST00000638567 HPSEQ9Y251 543 aa18.08■□□□□ 0.49
SCARB2-210ENST00000638567 GJA3Q9Y6H8 435 aa18.08■□□□□ 0.49
SCARB2-210ENST00000638567 PPEF1O14829 653 aaPredicted RBP18.08■□□□□ 0.48
SCARB2-210ENST00000638567 TRIM37O94972 964 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 SNCBQ16143 134 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 TADA2BQ86TJ2 420 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 SFR1Q86XK3 245 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 PIGOQ8TEQ8 1089 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 COMMD10Q9Y6G5 202 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 HNRNPDLO14979 420 aaKnown RBP18.08■□□□□ 0.48
SCARB2-210ENST00000638567 PDE6BP35913 854 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 STK4Q13043 487 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 CUL1Q13616 776 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 RNF10Q8N5U6 811 aaKnown RBP18.08■□□□□ 0.48
SCARB2-210ENST00000638567 PCDHA6Q9UN73 950 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 PCDHA8Q9Y5H6 950 aa18.08■□□□□ 0.48
SCARB2-210ENST00000638567 CCDC188H7C350 402 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 HOXA7P31268 230 aaPredicted RBP18.07■□□□□ 0.48
SCARB2-210ENST00000638567 HSPA1LP34931 641 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 MFAP3P55082 362 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 DR1Q01658 176 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 DMP1Q13316 513 aaPredicted RBP18.07■□□□□ 0.48
SCARB2-210ENST00000638567 ITIH6Q6UXX5 1313 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 NEURL4Q96JN8 1562 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 WDR11Q9BZH6 1224 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 CIB2O75838 187 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 SUN1O94901 812 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 PTK2Q05397 1052 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 NCAPHQ15003 741 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 SGO2Q562F6 1265 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 ARHGEF16Q5VV41 709 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 RIN2Q8WYP3 895 aaPredicted RBP18.07■□□□□ 0.48
SCARB2-210ENST00000638567 P3H4Q92791 437 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 LRRC1Q9BTT6 524 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 CLRN2A0PK11 232 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 AOC3Q16853 763 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 TBC1D9BQ66K14 1250 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 CYP4F22Q6NT55 531 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.07■□□□□ 0.48
SCARB2-210ENST00000638567 AGXT2Q9BYV1 514 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 DDX47Q9H0S4 455 aaKnown RBP18.07■□□□□ 0.48
SCARB2-210ENST00000638567 COL15A1P39059 1388 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 NOP56O00567 594 aaKnown RBP18.07■□□□□ 0.48
SCARB2-210ENST00000638567 TSNAXIP1Q2TAA8 658 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 SNX12Q9UMY4 172 aa18.07■□□□□ 0.48
SCARB2-210ENST00000638567 POC1B-GALNT4F8VUJ3 575 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 HIP1RO75146 1068 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 MXI1P50539 228 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 CACNB3P54284 484 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 C12orf60Q5U649 245 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 PALM2Q8IXS6 379 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 CD209Q9NNX6 404 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 ZBTB5O15062 677 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 SRGNP10124 158 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 MAPK4P31152 587 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 RSAD2Q8WXG1 361 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 PPLO60437 1756 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 MYOM1P52179 1685 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 ECEL1O95672 775 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 TROVE2P10155 538 aaKnown RBP eCLIP18.06■□□□□ 0.48
SCARB2-210ENST00000638567 SYDE2Q5VT97 1194 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 TMOD4Q9NZQ9 345 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 SNX24Q9Y343 169 aa18.06■□□□□ 0.48
SCARB2-210ENST00000638567 USP17L10C9JJH3 530 aa18.05■□□□□ 0.48
SCARB2-210ENST00000638567 H2AFXP16104 143 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-210ENST00000638567 SLC8A1P32418 973 aa18.05■□□□□ 0.48
SCARB2-210ENST00000638567 RASSF2P50749 326 aa18.05■□□□□ 0.48
SCARB2-210ENST00000638567 MAP3K14Q99558 947 aa18.05■□□□□ 0.48
SCARB2-210ENST00000638567 PI4KBQ9UBF8 816 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms