RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 TSHZ1Q6ZSZ6 1077 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 EFHBQ8N7U6 833 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 LINC00116Q8NCU8 138 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 C1orf162Q8NEQ5 155 aaPredicted RBP4.87□□□□□ -1.63
CHD2-228ENST00000637613 DIO2Q92813 273 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 TCTN2Q96GX1 697 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 AHCYL2Q96HN2 611 aaKnown RBP4.87□□□□□ -1.63
CHD2-228ENST00000637613 SCYL1Q96KG9 808 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 GPR101Q96P66 508 aaPredicted RBP4.87□□□□□ -1.63
CHD2-228ENST00000637613 ALG1Q9BT22 464 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 DUSP15Q9H1R2 295 aaPredicted RBP4.87□□□□□ -1.63
CHD2-228ENST00000637613 PRDM5Q9NQX1 630 aaPredicted RBP4.87□□□□□ -1.63
CHD2-228ENST00000637613 GPATCH2Q9NW75 528 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 THG1LQ9NWX6 298 aaKnown RBP4.87□□□□□ -1.63
CHD2-228ENST00000637613 CLEC1BQ9P126 229 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 IP6K2Q9UHH9 426 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 NOB1Q9ULX3 412 aaKnown RBP4.87□□□□□ -1.63
CHD2-228ENST00000637613 ANKRD6Q9Y2G4 727 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 ZKSCAN5Q9Y2L8 839 aa4.87□□□□□ -1.63
CHD2-228ENST00000637613 LUC7L2Q9Y383 392 aaKnown RBP4.87□□□□□ -1.63
CHD2-228ENST00000637613 PTPDC1A2A3K4 754 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 CCDC66A2RUB6 948 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 PRR33A8MZF0 331 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 MEIS1O00470 390 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 TRIM13O60858 407 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 SOD2P04179 222 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 ZBTB48P10074 688 aaPredicted RBP4.86□□□□□ -1.63
CHD2-228ENST00000637613 LPOP22079 712 aaPredicted RBP4.86□□□□□ -1.63
CHD2-228ENST00000637613 RECQLP46063 649 aaPredicted RBP4.86□□□□□ -1.63
CHD2-228ENST00000637613 SEPHS1P49903 392 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 KPNA1P52294 538 aaPredicted RBP4.86□□□□□ -1.63
CHD2-228ENST00000637613 PHC1P78364 1004 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 GTF2H3Q13889 308 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 GBX1Q14549 363 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 PCBP2Q15366 365 aaKnown RBP eCLIP4.86□□□□□ -1.63
CHD2-228ENST00000637613 INF2Q27J81 1249 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 RGL3Q3MIN7 710 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 FAM47CQ5HY64 1035 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 MBLAC2Q68D91 279 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 EPM2AIP1Q7L775 607 aaPredicted RBP4.86□□□□□ -1.63
CHD2-228ENST00000637613 TPH2Q8IWU9 490 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 CMTR2Q8IYT2 770 aaKnown RBP4.86□□□□□ -1.63
CHD2-228ENST00000637613 SLC5A5Q92911 643 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 FBXW5Q969U6 566 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 FAXDC2Q96IV6 333 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 AIFM3Q96NN9 605 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 NUP88Q99567 741 aaPredicted RBP4.86□□□□□ -1.63
CHD2-228ENST00000637613 XYLT2Q9H1B5 865 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 ASCC2Q9H1I8 757 aaPredicted RBP4.86□□□□□ -1.63
CHD2-228ENST00000637613 IPPKQ9H8X2 491 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 OXSMQ9NWU1 459 aa4.86□□□□□ -1.63
CHD2-228ENST00000637613 TRBV23OR9-2A0A075B6M9 112 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 OVOL3O00110 214 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 GSTA4O15217 222 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 FGF10O15520 208 aaPredicted RBP4.85□□□□□ -1.63
CHD2-228ENST00000637613 PCDHGA12O60330 932 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 SNUPNO95149 360 aaKnown RBP4.85□□□□□ -1.63
CHD2-228ENST00000637613 SRGAP2CP0DJJ0 459 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 MYBL2P10244 700 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 CLCN7P51798 805 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 TCIRG1Q13488 830 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 ODF1Q14990 250 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 TERF2Q15554 542 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 LONRF3Q496Y0 759 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 HABP4Q5JVS0 413 aaKnown RBP4.85□□□□□ -1.63
CHD2-228ENST00000637613 GPR158Q5T848 1215 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 TCERG1LQ5VWI1 586 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 C11orf74Q86VG3 221 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 USHBP1Q8N6Y0 703 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 PANK1Q8TE04 598 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 IL17RAQ96F46 866 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 CCDC120Q96HB5 630 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 SARGQ9BW04 601 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 CARS2Q9HA77 564 aaKnown RBP4.85□□□□□ -1.63
CHD2-228ENST00000637613 H2AFY2Q9P0M6 372 aaPredicted RBP4.85□□□□□ -1.63
CHD2-228ENST00000637613 CBLCQ9ULV8 474 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 GIT1Q9Y2X7 761 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 PCDHGA9Q9Y5G4 932 aaKnown RBP4.85□□□□□ -1.63
CHD2-228ENST00000637613 PCDHGA8Q9Y5G5 932 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 PCDHGA7Q9Y5G6 932 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 PCDHGA6Q9Y5G7 932 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 PCDHGA3Q9Y5H0 932 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 PCDHGA2Q9Y5H1 932 aa4.85□□□□□ -1.63
CHD2-228ENST00000637613 VSTM5A8MXK1 200 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 FAM47E-STBD1D6RA91 191 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 ZNF561-AS1K7EIQ3 104 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 IFRD1O00458 451 aaPredicted RBP4.84□□□□□ -1.63
CHD2-228ENST00000637613 CREB3O43889 395 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 CBX7O95931 251 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 LDHAP00338 332 aaKnown RBP4.84□□□□□ -1.63
CHD2-228ENST00000637613 MT-CO1P00395 513 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 CFBP00751 764 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 LTFP02788 710 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 PAMP19021 973 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 GRK2P25098 689 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 TPP2P29144 1249 aaPredicted RBP4.84□□□□□ -1.63
CHD2-228ENST00000637613 CYP2C19P33261 490 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 GRK3P35626 688 aa4.84□□□□□ -1.63
CHD2-228ENST00000637613 SMAD3P84022 425 aaKnown RBP4.84□□□□□ -1.63
CHD2-228ENST00000637613 LRRC32Q14392 662 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms