RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 CASS4Q9NQ75 786 aa18.86■□□□□ 0.61
CACNA1A-225ENST00000636389 SPATS2LQ9NUQ6 558 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-225ENST00000636389 DOLKQ9UPQ8 538 aa18.86■□□□□ 0.61
CACNA1A-225ENST00000636389 ARMC9Q7Z3E5 817 aa18.86■□□□□ 0.61
CACNA1A-225ENST00000636389 MRFAP1L1Q96HT8 127 aa18.86■□□□□ 0.61
CACNA1A-225ENST00000636389 RPN1P04843 607 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 GSNP06396 782 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 OTUB1Q96FW1 271 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 KRT40Q6A162 431 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 DDX42Q86XP3 938 aaKnown RBP eCLIP18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 SCAF11Q99590 1463 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 PJA2O43164 708 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 PRKCQQ04759 706 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 METTL22Q9BUU2 404 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 NBNO60934 754 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 ASPSCR1Q9BZE9 553 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 XPO4Q9C0E2 1151 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 DDIT3P35638 169 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 ZAP70P43403 619 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 ARL4DP49703 201 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 RPF1Q9H9Y2 349 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 ADD3Q9UEY8 706 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 OR52Z1P0C646 297 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 SLCO1A2P46721 670 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 ARMCX2Q7L311 632 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 NEK8Q86SG6 692 aa18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 C6orf203Q9P0P8 240 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 COPG1Q9Y678 874 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-225ENST00000636389 PRR23D1E9PI22 279 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 F5H423 210 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 PRR23D2P0DMB1 279 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 VCAM1P19320 739 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 STXBP2Q15833 593 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 YAF2Q8IY57 180 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 NCOA1Q15788 1441 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 CCT5P48643 541 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 OSBPL10Q9BXB5 764 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 ZCWPW1Q9H0M4 648 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 HSPA4LO95757 839 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 PCYT1AP49585 367 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 TAF1BQ53T94 588 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 OR6B2Q6IFH4 312 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 SCN4BQ8IWT1 228 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 TEX2Q8IWB9 1127 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 PGBD3Q8N328 593 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 TRIM11Q96F44 468 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 TRIM37O94972 964 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 PLEKHM2Q8IWE5 1019 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 DBNDD2Q9BQY9 259 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 RASGRF2O14827 1237 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 FMNL1O95466 1100 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 AFPP02771 609 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 KLRF2D3W0D1 207 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 CXCR5P32302 372 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 CCDC157Q569K6 752 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 OR9Q1Q8NGQ5 310 aa18.84■□□□□ 0.61
CACNA1A-225ENST00000636389 PPP2R5BQ15173 497 aa18.83■□□□□ 0.61
CACNA1A-225ENST00000636389 KRT7P08729 469 aa18.83■□□□□ 0.61
CACNA1A-225ENST00000636389 MCTP2Q6DN12 878 aa18.83■□□□□ 0.61
CACNA1A-225ENST00000636389 CRLF3Q8IUI8 442 aa18.83■□□□□ 0.61
CACNA1A-225ENST00000636389 ZNF507Q8TCN5 953 aa18.83■□□□□ 0.61
CACNA1A-225ENST00000636389 ZC3H15Q8WU90 426 aaKnown RBP18.83■□□□□ 0.61
CACNA1A-225ENST00000636389 EXOC1LA0A1B0GW35 172 aa18.83■□□□□ 0.61
CACNA1A-225ENST00000636389 EFCAB8A8MWE9 144 aa18.83■□□□□ 0.61
CACNA1A-225ENST00000636389 ARHGAP10A1A4S6 786 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 KRT4P19013 534 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 NEK2P51955 445 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 TTC23LQ6PF05 361 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 RNF135Q8IUD6 432 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 EGFL8Q99944 293 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 MAP10Q9P2G4 905 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 SNX5Q9Y5X3 404 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 JAK2O60674 1132 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 LVRNQ6Q4G3 990 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 NDFIP2Q9NV92 336 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 DENND3A2RUS2 1198 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 PPP1R14AQ96A00 147 aa18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 UBE2TQ9NPD8 197 aaPredicted RBP18.83■□□□□ 0.6
CACNA1A-225ENST00000636389 CLIC2O15247 247 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 SLC17A8Q8NDX2 589 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 ZBED1O96006 694 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 ESRRAP11474 423 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 MTBPQ96DY7 904 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 USP17L12C9JPN9 530 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 USP17L21D6R901 530 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 PSMC2P35998 433 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 DDX53Q86TM3 631 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 GCNT4Q9P109 453 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 PLTPP55058 493 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 CC2D2BQ6DHV5 1058 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 ZNF790Q6PG37 636 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 FAF2Q96CS3 445 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 TRAF3IP3Q9Y228 551 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 GUCA1CO95843 209 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 CEP170P1Q96L14 293 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 JPH2Q9BR39 696 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 NCKAP5LQ9HCH0 1330 aa18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 AARSP49588 968 aaKnown RBP eCLIP18.82■□□□□ 0.6
CACNA1A-225ENST00000636389 PAPOLAP51003 745 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms