RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 ERAP1Q9NZ08 941 aa21.65■■□□□ 1.06
CLN6-213ENST00000636212 TREHO43280 583 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 NBNO60934 754 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 MYOGP15173 224 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 HOXC8P31273 242 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 ARHGAP4P98171 946 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 ERICH6BQ5W0A0 696 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 RUFY3Q7L099 469 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 PGBD1Q96JS3 809 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 AZI2Q9H6S1 392 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 JPH1Q9HDC5 661 aaPredicted RBP21.64■■□□□ 1.05
CLN6-213ENST00000636212 KCNH7Q9NS40 1196 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 CYP46A1Q9Y6A2 500 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 GBF1Q92538 1859 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 DOCK5Q9H7D0 1870 aa21.64■■□□□ 1.05
CLN6-213ENST00000636212 NID2Q14112 1375 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 PRPF3O43395 683 aaKnown RBP21.63■■□□□ 1.05
CLN6-213ENST00000636212 TLL1O43897 1013 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 LGR5O75473 907 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 CA3P07451 260 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 IGFBP4P22692 258 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 GNA11P29992 359 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 WDR5P61964 334 aaKnown RBP21.63■■□□□ 1.05
CLN6-213ENST00000636212 HIC1Q14526 733 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 CEP55Q53EZ4 464 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 WNT8BQ93098 351 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 AGXT2Q9BYV1 514 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 SLC9A2Q9UBY0 812 aa21.63■■□□□ 1.05
CLN6-213ENST00000636212 COL6A3P12111 3177 aa21.62■■□□□ 1.05
CLN6-213ENST00000636212 GSTTP1A0A1W2PQM5 241 aa21.62■■□□□ 1.05
CLN6-213ENST00000636212 ESYT2A0FGR8 921 aa21.62■■□□□ 1.05
CLN6-213ENST00000636212 SREBF1P36956 1147 aa21.62■■□□□ 1.05
CLN6-213ENST00000636212 GPNMBQ14956 572 aa21.62■■□□□ 1.05
CLN6-213ENST00000636212 RSPH3Q86UC2 560 aa21.62■■□□□ 1.05
CLN6-213ENST00000636212 CCDC148Q8NFR7 591 aa21.62■■□□□ 1.05
CLN6-213ENST00000636212 BICD2Q8TD16 824 aa21.62■■□□□ 1.05
CLN6-213ENST00000636212 TMEM260Q9NX78 707 aa21.62■■□□□ 1.05
CLN6-213ENST00000636212 NFASCO94856 1347 aa21.61■■□□□ 1.05
CLN6-213ENST00000636212 CLK2P49760 499 aaKnown RBP21.61■■□□□ 1.05
CLN6-213ENST00000636212 PPFIA1Q13136 1202 aa21.61■■□□□ 1.05
CLN6-213ENST00000636212 JAKMIP3Q5VZ66 844 aa21.61■■□□□ 1.05
CLN6-213ENST00000636212 TRAF7Q6Q0C0 670 aa21.61■■□□□ 1.05
CLN6-213ENST00000636212 REXO1Q8N1G1 1221 aaKnown RBP21.61■■□□□ 1.05
CLN6-213ENST00000636212 LMBR1Q8WVP7 490 aa21.61■■□□□ 1.05
CLN6-213ENST00000636212 RNF26Q9BY78 433 aaPredicted RBP21.61■■□□□ 1.05
CLN6-213ENST00000636212 ZMYND12Q9H0C1 365 aa21.61■■□□□ 1.05
CLN6-213ENST00000636212 ZSWIM6Q9HCJ5 1215 aa21.61■■□□□ 1.05
CLN6-213ENST00000636212 CTSHP09668 335 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 MARK3P27448 753 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 TAF2Q6P1X5 1199 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 NIPA1Q7RTP0 329 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 TRIM22Q8IYM9 498 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 PPM1EQ8WY54 764 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 SEPT8Q92599 483 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 PHKBQ93100 1093 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 SLC26A6Q9BXS9 759 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 TCEAL9Q9UHQ7 104 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 TELO2Q9Y4R8 837 aa21.6■■□□□ 1.05
CLN6-213ENST00000636212 MEIS1O00470 390 aa21.59■■□□□ 1.05
CLN6-213ENST00000636212 CPLX1O14810 134 aa21.59■■□□□ 1.05
CLN6-213ENST00000636212 AMHP03971 560 aa21.59■■□□□ 1.05
CLN6-213ENST00000636212 ARP10275 920 aa21.59■■□□□ 1.05
CLN6-213ENST00000636212 IFNAR1P17181 557 aa21.59■■□□□ 1.05
CLN6-213ENST00000636212 PDIA3P30101 505 aaKnown RBP21.59■■□□□ 1.05
CLN6-213ENST00000636212 CCT2P78371 535 aaKnown RBP21.59■■□□□ 1.05
CLN6-213ENST00000636212 GRIK4Q16099 956 aa21.59■■□□□ 1.05
CLN6-213ENST00000636212 CPLX2Q6PUV4 134 aaKnown RBP21.59■■□□□ 1.05
CLN6-213ENST00000636212 PLA2G4DQ86XP0 818 aa21.59■■□□□ 1.05
CLN6-213ENST00000636212 DBF4BQ8NFT6 615 aa21.59■■□□□ 1.05
CLN6-213ENST00000636212 CYP2W1Q8TAV3 490 aa21.59■■□□□ 1.05
CLN6-213ENST00000636212 TM6SF1Q9BZW5 370 aa21.59■■□□□ 1.05
CLN6-213ENST00000636212 AGO4Q9HCK5 861 aaKnown RBP21.59■■□□□ 1.05
CLN6-213ENST00000636212 RRN3P2A6NIE6 340 aa21.58■■□□□ 1.05
CLN6-213ENST00000636212 GTPBP6O43824 516 aaPredicted RBP21.58■■□□□ 1.05
CLN6-213ENST00000636212 RPLP2P05387 115 aaKnown RBP21.58■■□□□ 1.05
CLN6-213ENST00000636212 EVCP57679 992 aa21.58■■□□□ 1.05
CLN6-213ENST00000636212 ADAM17P78536 824 aa21.58■■□□□ 1.05
CLN6-213ENST00000636212 DEFB103AP81534 67 aa21.58■■□□□ 1.05
CLN6-213ENST00000636212 MBTPS1Q14703 1052 aa21.58■■□□□ 1.05
CLN6-213ENST00000636212 TSPYL2Q9H2G4 693 aaPredicted RBP21.58■■□□□ 1.05
CLN6-213ENST00000636212 TUBE1Q9UJT0 475 aa21.58■■□□□ 1.05
CLN6-213ENST00000636212 TRPC6Q9Y210 931 aa21.58■■□□□ 1.05
CLN6-213ENST00000636212 ACTR2P61160 394 aa21.57■■□□□ 1.04
CLN6-213ENST00000636212 SETQ01105 290 aaPredicted RBP21.57■■□□□ 1.04
CLN6-213ENST00000636212 SSRP1Q08945 709 aaKnown RBP21.57■■□□□ 1.04
CLN6-213ENST00000636212 PKN1Q16512 942 aa21.57■■□□□ 1.04
CLN6-213ENST00000636212 PLEKHG4Q58EX7 1191 aa21.57■■□□□ 1.04
CLN6-213ENST00000636212 APBB2Q92870 758 aa21.57■■□□□ 1.04
CLN6-213ENST00000636212 RAD9AQ99638 391 aa21.57■■□□□ 1.04
CLN6-213ENST00000636212 TET1Q8NFU7 2136 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 EIF5BO60841 1220 aaKnown RBP21.56■■□□□ 1.04
CLN6-213ENST00000636212 GJB5O95377 273 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 CYP3A4P08684 503 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 SLC26A2P50443 739 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 STAT5BP51692 787 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 IGBP1P78318 339 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 TAP1Q03518 808 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 TOB2Q14106 344 aaPredicted RBP21.56■■□□□ 1.04
CLN6-213ENST00000636212 ADGRE1Q14246 886 aa21.56■■□□□ 1.04
CLN6-213ENST00000636212 NTRK3Q16288 839 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms