RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 LRRC41Q15345 812 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 NSMFQ6X4W1 530 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 KCNH7Q9NS40 1196 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 TMOD4Q9NZQ9 345 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 WRAP73Q9P2S5 460 aaPredicted RBP20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 ZBTB39O15060 712 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 EPHX2P34913 555 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 BAATQ14032 418 aaPredicted RBP20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 PCNX4Q63HM2 1172 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 DPY19L2Q6NUT2 758 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 RNF207Q6ZRF8 634 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 ZNF397Q8NF99 534 aaPredicted RBP20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 TRIM47Q96LD4 638 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 TAB2Q9NYJ8 693 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 PCDHA2Q9Y5H9 948 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 UBIAD1Q9Y5Z9 338 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 GAS7O60861 476 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 SETQ01105 290 aaPredicted RBP20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 PGM5Q15124 567 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 SPECC1LQ69YQ0 1117 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 CENPPQ6IPU0 288 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 SYT2Q8N9I0 419 aaPredicted RBP20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 CCDC112Q8NEF3 446 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 CDCA5Q96FF9 252 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 DYDC2Q96IM9 177 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 LRRC27Q9C0I9 530 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 VPS16Q9H269 839 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 BCAS3Q9H6U6 928 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 PANK4Q9NVE7 773 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 PKD2L1Q9P0L9 805 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 DNM3Q9UQ16 869 aa20.53■□□□□ 0.88
PCDHB2-202ENST00000622947 DHX15O43143 795 aaKnown RBP20.52■□□□□ 0.88
PCDHB2-202ENST00000622947 PPP1R12BO60237 982 aaPredicted RBP20.52■□□□□ 0.88
PCDHB2-202ENST00000622947 SFPQP23246 707 aaKnown RBP eCLIP20.52■□□□□ 0.88
PCDHB2-202ENST00000622947 COPB1P53618 953 aaKnown RBP20.52■□□□□ 0.88
PCDHB2-202ENST00000622947 TKFCQ3LXA3 575 aa20.52■□□□□ 0.88
PCDHB2-202ENST00000622947 USP50Q70EL3 339 aaPredicted RBP20.52■□□□□ 0.88
PCDHB2-202ENST00000622947 CCDC150Q8NCX0 1101 aa20.52■□□□□ 0.88
PCDHB2-202ENST00000622947 MAP3K20Q9NYL2 800 aaKnown RBP20.52■□□□□ 0.88
PCDHB2-202ENST00000622947 TBC1D7Q9P0N9 293 aa20.52■□□□□ 0.88
PCDHB2-202ENST00000622947 BCRP11274 1271 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 ITGB3BPQ13352 177 aaPredicted RBP20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 CEP135Q66GS9 1140 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 PIGOQ8TEQ8 1089 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 CTAGE1Q96RT6 745 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 RMDN3Q96TC7 470 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 PDCD2LQ9BRP1 358 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 ELP3Q9H9T3 547 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 LCTP09848 1927 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 FRMD3A2A2Y4 597 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 USP27XA6NNY8 438 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 IRF6O14896 467 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 OAZ1P54368 228 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 IRX3P78415 501 aaPredicted RBP20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 PAXIP1Q6ZW49 1069 aaPredicted RBP20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 CSGALNACT2Q8N6G5 542 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 BHMT2Q9H2M3 363 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 THAP9Q9H5L6 903 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 POLD4Q9HCU8 107 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 RABGAP1Q9Y3P9 1069 aa20.51■□□□□ 0.87
PCDHB2-202ENST00000622947 DDX39AO00148 427 aaKnown RBP20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 ATP2A1O14983 1001 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 GIT2Q14161 759 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 TPH2Q8IWU9 490 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 GUF1Q8N442 669 aaKnown RBP20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 TC2NQ8N9U0 490 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 RBM46Q8TBY0 533 aaKnown RBP20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 TMX1Q9H3N1 280 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 CSADQ9Y600 493 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 GLTPD2A6NH11 291 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 TNNT1P13805 278 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 ADKP55263 362 aaKnown RBP20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 PSMD2Q13200 908 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 TMEM139Q8IV31 216 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 SAMD3Q8N6K7 520 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 RUSC1Q9BVN2 902 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 AGO4Q9HCK5 861 aaKnown RBP20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 JADE2Q9NQC1 790 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 KIAA1217Q5T5P2 1943 aa20.5■□□□□ 0.87
PCDHB2-202ENST00000622947 N4BP3O15049 544 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 MYCLP12524 364 aaPredicted RBP20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 GPR162Q16538 588 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 FAM26FQ5R3K3 315 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 NIPA1Q7RTP0 329 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 RIT2Q99578 217 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 REEP2Q9BRK0 252 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 TUFT1Q9NNX1 390 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 BMP2KQ9NSY1 1161 aaPredicted RBP20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 PNMA2Q9UL42 364 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 STK24Q9Y6E0 443 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 LOC285556D6RIA3 1793 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 ERICH4A6NGS2 130 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 RSPH10B2B2RC85 870 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 ATP9AO75110 1047 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 RSPH10BP0C881 870 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 SPAG1Q07617 926 aa20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 NAA30Q147X3 362 aaPredicted RBP20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 ZC3H15Q8WU90 426 aaKnown RBP20.49■□□□□ 0.87
PCDHB2-202ENST00000622947 OTUD5Q96G74 571 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms