RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 DIAPH3Q9NSV4 1193 aa9.06□□□□□ -0.96
CLK1-215ENST00000621181 LAMA4Q16363 1823 aa9.06□□□□□ -0.96
CLK1-215ENST00000621181 BAZ2BQ9UIF8 2168 aaKnown RBP9.05□□□□□ -0.96
CLK1-215ENST00000621181 NLRC5Q86WI3 1866 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 HOXC8P31273 242 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 CTNNB1P35222 781 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 GHRHRQ02643 423 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 ZP2Q05996 745 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 HDAC1Q13547 482 aaPredicted RBP9.05□□□□□ -0.96
CLK1-215ENST00000621181 SAMD3Q8N6K7 520 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 APBB2Q92870 758 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 GPKOWQ92917 476 aaPredicted RBP eCLIP9.05□□□□□ -0.962e-12■□□□□ 8.8
CLK1-215ENST00000621181 PRKAG3Q9UGI9 489 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.05□□□□□ -0.96
CLK1-215ENST00000621181 GCOM1H8Y6P7 765 aaPredicted RBP9.05□□□□□ -0.96
CLK1-215ENST00000621181 NCK2O43639 380 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 PPP1R11O60927 126 aaPredicted RBP9.05□□□□□ -0.96
CLK1-215ENST00000621181 CSPG5O95196 566 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 POLR2MP0CAP2 368 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 MRE11P49959 708 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 TRAF1Q13077 416 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 GNPTABQ3T906 1256 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 ADHFE1Q8IWW8 467 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 IL17RAQ96F46 866 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 C11orf84Q9BUA3 381 aaPredicted RBP9.05□□□□□ -0.96
CLK1-215ENST00000621181 DSCC1Q9BVC3 393 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 UPF3BQ9BZI7 483 aaKnown RBP9.05□□□□□ -0.96
CLK1-215ENST00000621181 SETD4Q9NVD3 440 aa9.05□□□□□ -0.96
CLK1-215ENST00000621181 ZNF215Q9UL58 517 aaPredicted RBP9.05□□□□□ -0.96
CLK1-215ENST00000621181 KAT6AQ92794 2004 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 POTEB3A0JP26 581 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 ARHGAP4P98171 946 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 SP4Q02446 784 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 NHLH1Q02575 133 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 NEDD9Q14511 834 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 POTEBQ6S5H4 581 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 METTL7BQ6UX53 244 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 CYFIP1Q7L576 1253 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 RPAINQ86UA6 219 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 TRIM50Q86XT4 487 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 FIBCD1Q8N539 461 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 MTMR8Q96EF0 704 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 POP1Q99575 1024 aaKnown RBP9.04□□□□□ -0.96
CLK1-215ENST00000621181 OSBPL7Q9BZF2 842 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 MAD2L2Q9UI95 211 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 RWDD3Q9Y3V2 267 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 RALGAPA2Q2PPJ7 1873 aa9.04□□□□□ -0.96
CLK1-215ENST00000621181 HIP1O00291 1037 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 CHRM1P11229 460 aaPredicted RBP9.03□□□□□ -0.96
CLK1-215ENST00000621181 COL19A1Q14993 1142 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 CLUL1Q15846 466 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 FBXL18Q96ME1 805 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 KCNH6Q9H252 994 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 BCAS3Q9H6U6 928 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 RTEL1Q9NZ71 1219 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 COL4A6Q14031 1691 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 ADGRA3Q8IWK6 1321 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 PALM3A6NDB9 673 aaPredicted RBP9.03□□□□□ -0.96
CLK1-215ENST00000621181 C5orf67F2Z3F1 127 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 STAM2O75886 525 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 RB1P06400 928 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 GHRP10912 638 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 IRS1P35568 1242 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 BMPR1AP36894 532 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 TRDNQ13061 729 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 UTP14CQ5TAP6 766 aaKnown RBP9.03□□□□□ -0.96
CLK1-215ENST00000621181 HFE2Q6ZVN8 426 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 LMBR1Q8WVP7 490 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 INPP4AQ96PE3 977 aaPredicted RBP9.03□□□□□ -0.96
CLK1-215ENST00000621181 PIGSQ96S52 555 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 GPR20Q99678 358 aa9.03□□□□□ -0.96
CLK1-215ENST00000621181 NRCAMQ92823 1304 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 DOCK5Q9H7D0 1870 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 ZNF318Q5VUA4 2279 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 PNMA6FA0A0J9YX94 578 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 ERICH2A1L162 156 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 SPATA31C2B4DYI2 1134 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 GRM6O15303 877 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 FIBPO43427 364 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 LTBRP36941 435 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 MRPS9P82933 396 aaKnown RBP9.02□□□□□ -0.97
CLK1-215ENST00000621181 DLX2Q07687 328 aaPredicted RBP9.02□□□□□ -0.97
CLK1-215ENST00000621181 SEC23AQ15436 765 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 SMAD2Q15796 467 aaKnown RBP9.02□□□□□ -0.97
CLK1-215ENST00000621181 TAF2Q6P1X5 1199 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 RSPH3Q86UC2 560 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 PLEKHM2Q8IWE5 1019 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 MFSD14AQ96MC6 490 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 LMAN2LQ9H0V9 348 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 IGFLR1Q9H665 355 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 RIOX1Q9H6W3 641 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 MUTYHQ9UIF7 546 aa9.02□□□□□ -0.97
CLK1-215ENST00000621181 CHRNA1P02708 482 aa9.01□□□□□ -0.97
CLK1-215ENST00000621181 ICAM3P32942 547 aa9.01□□□□□ -0.97
CLK1-215ENST00000621181 ADAM17P78536 824 aa9.01□□□□□ -0.97
CLK1-215ENST00000621181 HYAL1Q12794 435 aa9.01□□□□□ -0.97
CLK1-215ENST00000621181 BTG3Q14201 252 aaPredicted RBP9.01□□□□□ -0.97
CLK1-215ENST00000621181 CTC1Q2NKJ3 1217 aa9.01□□□□□ -0.97
CLK1-215ENST00000621181 FAM26DQ5JW98 314 aa9.01□□□□□ -0.97
CLK1-215ENST00000621181 CYB5R4Q7L1T6 521 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms