RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 MYOCDQ8IZQ8 938 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 CCDC82Q8N4S0 544 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 TGS1Q96RS0 853 aaKnown RBP12.84□□□□□ -0.35
TARDBP-221ENST00000619555 SENP7Q9BQF6 1050 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 PSTPIP2Q9H939 334 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 SUGCTQ9HAC7 445 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 EMSYQ7Z589 1322 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 COL4A4P53420 1690 aaPredicted RBP12.83□□□□□ -0.35
TARDBP-221ENST00000619555 AMHP03971 560 aa12.83□□□□□ -0.36
TARDBP-221ENST00000619555 LIFRP42702 1097 aa12.83□□□□□ -0.36
TARDBP-221ENST00000619555 ARHGAP4P98171 946 aa12.83□□□□□ -0.36
TARDBP-221ENST00000619555 UBE2SQ16763 222 aa12.83□□□□□ -0.36
TARDBP-221ENST00000619555 AAK1Q2M2I8 961 aa12.83□□□□□ -0.36
TARDBP-221ENST00000619555 ANO2Q9NQ90 1003 aa12.83□□□□□ -0.36
TARDBP-221ENST00000619555 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
TARDBP-221ENST00000619555 COG5Q9UP83 839 aa12.83□□□□□ -0.36
TARDBP-221ENST00000619555 SLC12A7Q9Y666 1083 aa12.83□□□□□ -0.36
TARDBP-221ENST00000619555 GSTTP1A0A1W2PQM5 241 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 CDC45O75419 566 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 CALM1P0DP23 149 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 CALM2P0DP24 149 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 CALM3P0DP25 149 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 GNAT1P11488 350 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 KCNA2P16389 499 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 ITGB5P18084 799 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 ADAM17P78536 824 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 TMTC3Q6ZXV5 915 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 FANCBQ8NB91 859 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 LMBR1Q8WVP7 490 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 SEPT8Q92599 483 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 HLA-CQ95604 372 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 GPRASP2Q96D09 838 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 C17orf80Q9BSJ5 609 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 LMCD1Q9NZU5 365 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 PKD2L1Q9P0L9 805 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 ZNF215Q9UL58 517 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-221ENST00000619555 INSL6Q9Y581 213 aa12.82□□□□□ -0.36
TARDBP-221ENST00000619555 SIP14410 1827 aa12.81□□□□□ -0.36
TARDBP-221ENST00000619555 CAND2O75155 1236 aa12.81□□□□□ -0.36
TARDBP-221ENST00000619555 UPP2O95045 317 aa12.81□□□□□ -0.36
TARDBP-221ENST00000619555 TCF7P36402 384 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-221ENST00000619555 HTRA4P83105 476 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-221ENST00000619555 FAM26DQ5JW98 314 aa12.81□□□□□ -0.36
TARDBP-221ENST00000619555 RUFY4Q6ZNE9 571 aa12.81□□□□□ -0.36
TARDBP-221ENST00000619555 HEATR3Q7Z4Q2 680 aa12.81□□□□□ -0.36
TARDBP-221ENST00000619555 MICU3Q86XE3 530 aa12.81□□□□□ -0.36
TARDBP-221ENST00000619555 GIMAP8Q8ND71 665 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-221ENST00000619555 PCDHA6Q9UN73 950 aa12.81□□□□□ -0.36
TARDBP-221ENST00000619555 PCDHA8Q9Y5H6 950 aa12.81□□□□□ -0.36
TARDBP-221ENST00000619555 UBIAD1Q9Y5Z9 338 aa12.81□□□□□ -0.36
TARDBP-221ENST00000619555 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.8□□□□□ -0.36
TARDBP-221ENST00000619555 SPDYE3A6NKU9 549 aa12.8□□□□□ -0.36
TARDBP-221ENST00000619555 CHRNA1P02708 482 aa12.8□□□□□ -0.36
TARDBP-221ENST00000619555 MARK3P27448 753 aa12.8□□□□□ -0.36
TARDBP-221ENST00000619555 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
TARDBP-221ENST00000619555 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
TARDBP-221ENST00000619555 SEPT1Q8WYJ6 367 aa12.8□□□□□ -0.36
TARDBP-221ENST00000619555 TOP1MTQ969P6 601 aa12.8□□□□□ -0.36
TARDBP-221ENST00000619555 CDHR1Q96JP9 859 aa12.8□□□□□ -0.36
TARDBP-221ENST00000619555 TCEANC2Q96MN5 208 aa12.8□□□□□ -0.36
TARDBP-221ENST00000619555 JADE2Q9NQC1 790 aa12.8□□□□□ -0.36
TARDBP-221ENST00000619555 NRCAMQ92823 1304 aa12.8□□□□□ -0.36
TARDBP-221ENST00000619555 COL9A1P20849 921 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 PPFIA1Q13136 1202 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 MTMR1Q13613 665 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 GRIK4Q16099 956 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 WWC2Q6AWC2 1192 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 SYNE3Q6ZMZ3 975 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 FBXO22Q8NEZ5 403 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 CYP2W1Q8TAV3 490 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 GLG1Q92896 1179 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 PGBD1Q96JS3 809 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 YME1L1Q96TA2 773 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 RAPGEFL1Q9UHV5 662 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 BRPF3Q9ULD4 1205 aa12.79□□□□□ -0.36
TARDBP-221ENST00000619555 GHRP10912 638 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 EXOSC10Q01780 885 aaKnown RBP12.78□□□□□ -0.36
TARDBP-221ENST00000619555 MGAT3Q09327 533 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 EPC2Q52LR7 807 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 MARCH8Q5T0T0 291 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 APOA5Q6Q788 366 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 DNAJB3Q8WWF6 145 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 ZBTB10Q96DT7 871 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 PCYT2Q99447 389 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 IFIH1Q9BYX4 1025 aaKnown RBP12.78□□□□□ -0.36
TARDBP-221ENST00000619555 SMARCAD1Q9H4L7 1026 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 ERAP1Q9NZ08 941 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
TARDBP-221ENST00000619555 CNTNAP5Q8WYK1 1306 aa12.78□□□□□ -0.36
TARDBP-221ENST00000619555 ARP10275 920 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 NAPAP54920 295 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 IGBP1P78318 339 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 FUT2Q10981 343 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 LPIN1Q14693 890 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 RTN1Q16799 776 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 ADCK5Q3MIX3 580 aa12.77□□□□□ -0.37
TARDBP-221ENST00000619555 RNF20Q5VTR2 975 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms