RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CD244Q9BZW8 370 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 RAPGEFL1Q9UHV5 662 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 B4E1Z4 1266 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 SASH1O94885 1247 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 ASMTLO95671 621 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 BMP7P18075 431 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 RPL13P26373 211 aaKnown RBP7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 SLURP1P55000 103 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 TCEA2Q15560 299 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 HHIPL2Q6UWX4 724 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 NOP9Q86U38 636 aaKnown RBP7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 OSTM1Q86WC4 334 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 PROSER1Q86XN7 944 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 PTRH1Q86Y79 214 aaKnown RBP7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 CLUHP3Q96NS8 147 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 CLIC6Q96NY7 704 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 SMURF1Q9HCE7 757 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 ATP23Q9Y6H3 246 aa7.47□□□□□ -1.21
SCAMP1-205ENST00000614488 PPP1R12AO14974 1030 aaPredicted RBP7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 CYP7B1O75881 506 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 IGFALSP35858 605 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 SARSP49591 514 aaKnown RBP7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 JAM2P57087 298 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 PRR31Q5SQ13 230 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 VASNQ6EMK4 673 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 JAZF1Q86VZ6 243 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 CISD2Q8N5K1 135 aaKnown RBP7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 APPBP2Q92624 585 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 PARD6AQ9NPB6 346 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 DLL4Q9NR61 685 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 WASF3Q9UPY6 502 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 COQ6Q9Y2Z9 468 aa7.46□□□□□ -1.22
SCAMP1-205ENST00000614488 A0A1B0GTL3 188 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 ACOT7O00154 380 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 CLASP2O75122 1294 aaKnown RBP7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 ASLP04424 464 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 KCNA6P17658 529 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 PTPN1P18031 435 aaKnown RBP7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 KRT15P19012 456 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 KCNC1P48547 511 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 CD276Q5ZPR3 534 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 EP400NLQ6ZTU2 488 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 C16orf86Q6ZW13 317 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 OVCH1Q7RTY7 1134 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 STK32CQ86UX6 486 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 ADGRG2Q8IZP9 1017 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 DTX3Q8N9I9 347 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 ZCCHC4Q9H5U6 513 aa7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 MRPL42Q9Y6G3 142 aaKnown RBP7.45□□□□□ -1.22
SCAMP1-205ENST00000614488 DNAJC8O75937 253 aaPredicted RBP7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 INHBBP09529 407 aa7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 RANGAP1P46060 587 aaPredicted RBP7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 PABPC4Q13310 644 aaKnown RBP eCLIP7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 FAM26FQ5R3K3 315 aa7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 BTBD8Q5XKL5 378 aa7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 ABHD17CQ6PCB6 329 aa7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 TMC5Q6UXY8 1006 aa7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 TTLL10Q6ZVT0 673 aa7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 DDX53Q86TM3 631 aaKnown RBP7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 SPATA25Q9BR10 227 aa7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 INTS7Q9NVH2 962 aaKnown RBP7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 FANCLQ9NW38 375 aa7.44□□□□□ -1.22
SCAMP1-205ENST00000614488 FAM90A27PA6NNH2 459 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 ZNF839A8K0R7 811 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 CDC45O75419 566 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 ENO2P09104 434 aaPredicted RBP7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 ZNF28P17035 718 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 TMEM177Q53S58 311 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 ZCCHC8Q6NZY4 707 aaKnown RBP7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 NOSTRINQ8IVI9 506 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 IGSF22Q8N9C0 903 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 ZSWIM3Q96MP5 696 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 RIC8BQ9NVN3 520 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 MAGEC2Q9UBF1 373 aaPredicted RBP7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 RBPJLQ9UBG7 517 aa7.43□□□□□ -1.22
SCAMP1-205ENST00000614488 ENPP3O14638 875 aa7.42□□□□□ -1.22
SCAMP1-205ENST00000614488 OPA1O60313 960 aa7.42□□□□□ -1.22
SCAMP1-205ENST00000614488 DBPQ10586 325 aaPredicted RBP7.42□□□□□ -1.22
SCAMP1-205ENST00000614488 RTP5Q14D33 572 aa7.42□□□□□ -1.22
SCAMP1-205ENST00000614488 ZNF761Q86XN6 746 aaPredicted RBP7.42□□□□□ -1.22
SCAMP1-205ENST00000614488 ADAMTS17Q8TE56 1095 aa7.42□□□□□ -1.22
SCAMP1-205ENST00000614488 XYLT2Q9H1B5 865 aa7.42□□□□□ -1.22
SCAMP1-205ENST00000614488 TBX22Q9Y458 520 aa7.42□□□□□ -1.22
SCAMP1-205ENST00000614488 TNPO3Q9Y5L0 923 aaKnown RBP7.42□□□□□ -1.22
SCAMP1-205ENST00000614488 SLC12A8A0AV02 714 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 C4BPAP04003 597 aaKnown RBP7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 CHGBP05060 677 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 FLT3P36888 993 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 HERVK_113P62684 666 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 PFKPQ01813 784 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 SKIDA1Q1XH10 827 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 OTOP1Q7RTM1 612 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 FEZF2Q8TBJ5 459 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 IGDCC4Q8TDY8 1250 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 FEZ1Q99689 392 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 SAMD15Q9P1V8 674 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 CD2APQ9Y5K6 639 aa7.41□□□□□ -1.22
SCAMP1-205ENST00000614488 SDSP20132 328 aa7.4□□□□□ -1.22
SCAMP1-205ENST00000614488 HOXA5P20719 270 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms