RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ADAM17P78536 824 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 SP4Q02446 784 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 TMTC3Q6ZXV5 915 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 RAB11FIP4Q86YS3 637 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 MYOCDQ8IZQ8 938 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 FANCBQ8NB91 859 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 LMBR1Q8WVP7 490 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 SEPT8Q92599 483 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 LRRC2Q9BYS8 371 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 SUGCTQ9HAC7 445 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 MTUS1Q9ULD2 1270 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 BRWD1Q9NSI6 2320 aa20.42■□□□□ 0.86
SSBP1-215ENST00000612337 ATP9AO75110 1047 aa20.41■□□□□ 0.86
SSBP1-215ENST00000612337 CTSHP09668 335 aa20.41■□□□□ 0.86
SSBP1-215ENST00000612337 KCNQ1P51787 676 aa20.41■□□□□ 0.86
SSBP1-215ENST00000612337 HTRA4P83105 476 aaPredicted RBP20.41■□□□□ 0.86
SSBP1-215ENST00000612337 ARHGAP4P98171 946 aa20.41■□□□□ 0.86
SSBP1-215ENST00000612337 HLA-CQ95604 372 aa20.41■□□□□ 0.86
SSBP1-215ENST00000612337 NRCAMQ92823 1304 aa20.41■□□□□ 0.86
SSBP1-215ENST00000612337 hCG_1642624A0A1W2PR95 340 aa20.4■□□□□ 0.86
SSBP1-215ENST00000612337 SPDYE3A6NKU9 549 aa20.4■□□□□ 0.86
SSBP1-215ENST00000612337 ITGB5P18084 799 aa20.4■□□□□ 0.86
SSBP1-215ENST00000612337 TCF7P36402 384 aaPredicted RBP20.4■□□□□ 0.86
SSBP1-215ENST00000612337 UBE2SQ16763 222 aa20.4■□□□□ 0.86
SSBP1-215ENST00000612337 BMP2KLQ5H9B9 411 aa20.4■□□□□ 0.86
SSBP1-215ENST00000612337 FAM26DQ5JW98 314 aa20.4■□□□□ 0.86
SSBP1-215ENST00000612337 MICU3Q86XE3 530 aa20.4■□□□□ 0.86
SSBP1-215ENST00000612337 CCDC82Q8N4S0 544 aa20.4■□□□□ 0.86
SSBP1-215ENST00000612337 SP7Q8TDD2 431 aaPredicted RBP20.4■□□□□ 0.86
SSBP1-215ENST00000612337 OSBPL7Q9BZF2 842 aa20.4■□□□□ 0.86
SSBP1-215ENST00000612337 UBIAD1Q9Y5Z9 338 aa20.4■□□□□ 0.86
SSBP1-215ENST00000612337 MTMR1Q13613 665 aa20.39■□□□□ 0.85
SSBP1-215ENST00000612337 RNF20Q5VTR2 975 aa20.39■□□□□ 0.85
SSBP1-215ENST00000612337 SYNE3Q6ZMZ3 975 aa20.39■□□□□ 0.85
SSBP1-215ENST00000612337 HEATR3Q7Z4Q2 680 aa20.39■□□□□ 0.85
SSBP1-215ENST00000612337 SEPT1Q8WYJ6 367 aa20.39■□□□□ 0.85
SSBP1-215ENST00000612337 APBB2Q92870 758 aa20.39■□□□□ 0.85
SSBP1-215ENST00000612337 NECAB3Q96P71 396 aaPredicted RBP20.39■□□□□ 0.85
SSBP1-215ENST00000612337 PCDHA6Q9UN73 950 aa20.39■□□□□ 0.85
SSBP1-215ENST00000612337 PCDHA8Q9Y5H6 950 aa20.39■□□□□ 0.85
SSBP1-215ENST00000612337 GSTTP1A0A1W2PQM5 241 aa20.38■□□□□ 0.85
SSBP1-215ENST00000612337 MAFGO15525 162 aa20.38■□□□□ 0.85
SSBP1-215ENST00000612337 RPAINQ86UA6 219 aa20.38■□□□□ 0.85
SSBP1-215ENST00000612337 TOP1MTQ969P6 601 aa20.38■□□□□ 0.85
SSBP1-215ENST00000612337 C17orf80Q9BSJ5 609 aa20.38■□□□□ 0.85
SSBP1-215ENST00000612337 JADE2Q9NQC1 790 aa20.38■□□□□ 0.85
SSBP1-215ENST00000612337 RBM28Q9NW13 759 aaKnown RBP20.38■□□□□ 0.85
SSBP1-215ENST00000612337 ERAP1Q9NZ08 941 aa20.38■□□□□ 0.85
SSBP1-215ENST00000612337 PPFIA1Q13136 1202 aa20.37■□□□□ 0.85
SSBP1-215ENST00000612337 TAF2Q6P1X5 1199 aa20.37■□□□□ 0.85
SSBP1-215ENST00000612337 APOA5Q6Q788 366 aa20.37■□□□□ 0.85
SSBP1-215ENST00000612337 TEX2Q8IWB9 1127 aa20.37■□□□□ 0.85
SSBP1-215ENST00000612337 FBXO22Q8NEZ5 403 aa20.37■□□□□ 0.85
SSBP1-215ENST00000612337 NEK1Q96PY6 1258 aa20.37■□□□□ 0.85
SSBP1-215ENST00000612337 IFIH1Q9BYX4 1025 aaKnown RBP20.37■□□□□ 0.85
SSBP1-215ENST00000612337 EHMT1Q9H9B1 1298 aa20.37■□□□□ 0.85
SSBP1-215ENST00000612337 COL4A6Q14031 1691 aa20.36■□□□□ 0.85
SSBP1-215ENST00000612337 CNTNAP5Q8WYK1 1306 aa20.36■□□□□ 0.85
SSBP1-215ENST00000612337 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.36■□□□□ 0.85
SSBP1-215ENST00000612337 WWC2Q6AWC2 1192 aa20.36■□□□□ 0.85
SSBP1-215ENST00000612337 RUFY4Q6ZNE9 571 aa20.36■□□□□ 0.85
SSBP1-215ENST00000612337 SAMD11Q96NU1 681 aa20.36■□□□□ 0.85
SSBP1-215ENST00000612337 YME1L1Q96TA2 773 aa20.36■□□□□ 0.85
SSBP1-215ENST00000612337 SMARCAD1Q9H4L7 1026 aa20.36■□□□□ 0.85
SSBP1-215ENST00000612337 PKD2L1Q9P0L9 805 aa20.36■□□□□ 0.85
SSBP1-215ENST00000612337 CHRNA1P02708 482 aa20.35■□□□□ 0.85
SSBP1-215ENST00000612337 MARK3P27448 753 aa20.35■□□□□ 0.85
SSBP1-215ENST00000612337 EXOSC10Q01780 885 aaKnown RBP20.35■□□□□ 0.85
SSBP1-215ENST00000612337 GRIK4Q16099 956 aa20.35■□□□□ 0.85
SSBP1-215ENST00000612337 TSGA10IPQ3SY00 556 aa20.35■□□□□ 0.85
SSBP1-215ENST00000612337 PPP1R18Q6NYC8 613 aa20.35■□□□□ 0.85
SSBP1-215ENST00000612337 GLG1Q92896 1179 aa20.35■□□□□ 0.85
SSBP1-215ENST00000612337 TUBE1Q9UJT0 475 aa20.35■□□□□ 0.85
SSBP1-215ENST00000612337 MBLAC1A4D2B0 266 aaPredicted RBP20.34■□□□□ 0.85
SSBP1-215ENST00000612337 UPP2O95045 317 aa20.34■□□□□ 0.85
SSBP1-215ENST00000612337 MGAT3Q09327 533 aa20.34■□□□□ 0.85
SSBP1-215ENST00000612337 FUT2Q10981 343 aa20.34■□□□□ 0.85
SSBP1-215ENST00000612337 RTN1Q16799 776 aa20.34■□□□□ 0.85
SSBP1-215ENST00000612337 EPC2Q52LR7 807 aa20.34■□□□□ 0.85
SSBP1-215ENST00000612337 CENPQQ7L2Z9 268 aaPredicted RBP20.34■□□□□ 0.85
SSBP1-215ENST00000612337 DHX32Q7L7V1 743 aaKnown RBP20.34■□□□□ 0.85
SSBP1-215ENST00000612337 RSPH3Q86UC2 560 aa20.34■□□□□ 0.85
SSBP1-215ENST00000612337 MXRA8Q9BRK3 442 aa20.34■□□□□ 0.85
SSBP1-215ENST00000612337 JPH1Q9HDC5 661 aaPredicted RBP20.34■□□□□ 0.85
SSBP1-215ENST00000612337 RIC8AQ9NPQ8 531 aa20.34■□□□□ 0.85
SSBP1-215ENST00000612337 KCNH7Q9NS40 1196 aa20.34■□□□□ 0.85
SSBP1-215ENST00000612337 hCG_1984214I3L0E3 225 aa20.33■□□□□ 0.85
SSBP1-215ENST00000612337 ZBTB43O43298 467 aa20.33■□□□□ 0.85
SSBP1-215ENST00000612337 NAPAP54920 295 aa20.33■□□□□ 0.85
SSBP1-215ENST00000612337 MARCH8Q5T0T0 291 aa20.33■□□□□ 0.85
SSBP1-215ENST00000612337 TYW1BQ6NUM6 668 aa20.33■□□□□ 0.85
SSBP1-215ENST00000612337 SKAP1Q86WV1 359 aa20.33■□□□□ 0.85
SSBP1-215ENST00000612337 ZNF713Q8N859 430 aaPredicted RBP20.33■□□□□ 0.85
SSBP1-215ENST00000612337 TCEANC2Q96MN5 208 aa20.33■□□□□ 0.85
SSBP1-215ENST00000612337 SLC9A2Q9UBY0 812 aa20.33■□□□□ 0.85
SSBP1-215ENST00000612337 BRPF3Q9ULD4 1205 aa20.33■□□□□ 0.85
SSBP1-215ENST00000612337 NFASCO94856 1347 aa20.32■□□□□ 0.84
SSBP1-215ENST00000612337 FOSP01100 380 aaPredicted RBP20.32■□□□□ 0.84
SSBP1-215ENST00000612337 GHRP10912 638 aa20.32■□□□□ 0.84
SSBP1-215ENST00000612337 LPIN1Q14693 890 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms